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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SLCO4A1-4:1 | LUAD | 17 | 0.545135 | coding | 66 | chr20 | 62724422 | 62732056 | + | 0.0704 | lnc-SLCO4A1-4 | 0.034 | 0 | 0 | 0 | 1 | noncoding | -0.286837999 | LSVIGITPHLESQQTKR | n[43]LSVIGITPHLESQQTKR | LSVIGITPHLESQQTKRREEDGGRGRRREVEEGGGWRSEGEGGGGRLAVPRITQPRKSVERWPALA |
lnc-SLCO4A1-4:1 | LUAD | 33 | 0.545135 | coding | 165 | chr20 | 62724422 | 62732056 | + | 0.0918 | lnc-SLCO4A1-4 | 0.208 | -4.011 | -3.63 | -3.836 | 1 | noncoding | -0.286837999 | LWFSLPAGGWATVSAEDAVCTAGLSLCVPALLR | LWFSLPAGGWATVSAEDAVCTAGLSLCVPALLR | LVMNRQTSPQEGTELPFPAPASFPGIFTVQFLKMAEVHFLTSPWQGCFHFGESGGRLWFSLPAGGWATVSAEDAVCTAGLSLCVPALLRKGKEKETESRRAGQHPEAKQVSRQPLLPNARGTSTRSPGQPSQVPTQFLSPAPRTGPQWSPRSRQRGFRTLRRVLG |
lnc-SLCO4A1-4:1 | OV | 16 | 0.545135 | coding | 66 | chr20 | 62724422 | 62732056 | + | 0.9988 | lnc-SLCO4A1-4 | 0.034 | 0 | 0 | 0 | 2 | noncoding | -0.286837999 | LSVIGITPHLESQQTK | n[145]LSVIGITPHLESQQTK | LSVIGITPHLESQQTKRREEDGGRGRRREVEEGGGWRSEGEGGGGRLAVPRITQPRKSVERWPALA |
lnc-SLCO4A1-4:1 | OV | 9 | 0.545135 | coding | 50 | chr20 | 62724422 | 62732056 | + | 0.5535 | lnc-SLCO4A1-4 | 0.114 | -5.391 | -4.729 | -4.847 | 1 | noncoding | -0.286837999 | RHSEEAAGK | n[145]RHSEEAAGK | MLSWKGTLRLSPDPTQPFRRHSEEAAGKSQEMDVQSSVCAHLRGSCPAGS |
lnc-SLCO4A1-4:1 | OV | 15 | 0.545135 | coding | 50 | chr20 | 62724422 | 62732056 | + | 0.4484 | lnc-SLCO4A1-4 | 0.114 | -5.391 | -4.729 | -4.847 | 1 | noncoding | -0.286837999 | SQEMDVQSSVCAHLR | n[145]SQEM[147]DVQSSVCAHLR | MLSWKGTLRLSPDPTQPFRRHSEEAAGKSQEMDVQSSVCAHLRGSCPAGS |
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