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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SMAD5-4:2 | OV | 15 | 0.0652969 | noncoding | 41 | chr5 | 136734605 | 136756108 | + | 0.9279 | lnc-SMAD5-4 | 0.126 | 0 | 0 | 0 | 5 | noncoding | -0.374136461 | LYPLINNSHSPFNLK | n[145]LYPLINNSHSPFNLK | LYPLINNSHSPFNLKHCTLSSATPHSLPPSPLLASFYSLFL |
lnc-SMAD6-2:1 | OV | 7 | 0.20331 | noncoding | 33 | chr15 | 66860302 | 66867023 | + | 0.5886 | lnc-SMAD6-2 | 0.099 | -5.75 | -5.024 | 0 | 2 | noncoding | -0.309867497 | EDGSELK | n[145]EDGSELK | LGKETQGEVRREDGSELKSREEPGAWSLGLPVL |
lnc-SMAD6-2:1 | OV | 8 | 0.20331 | noncoding | 33 | chr15 | 66860302 | 66867023 | + | 0.931 | lnc-SMAD6-2 | 0.099 | -5.75 | -5.024 | 0 | 26 | noncoding | -0.309867497 | REDGSELK | n[145]REDGSELK | LGKETQGEVRREDGSELKSREEPGAWSLGLPVL |
lnc-SMAD6-2:1 | PRAD | 17 | 0.20331 | noncoding | 110 | chr15 | 66860302 | 66867023 | + | 0.9169 | lnc-SMAD6-2 | 1 | -4.532 | -4.75 | -4.114 | 3 | noncoding | -0.309867497 | AATSGSVFPIGQGACGR | AATSGSVFPIGQGACGR | LQNPPSHLGTQWLHEAKSWSLVYLGVGRAHCLELTVSGTSAGQDRPHAYSMAISPRAATSGSVFPIGQGACGRFKPLMASSPGSSVGLGSGSLTNLSKSLTSPGLSFLIC |
lnc-SMAD6-2:1 | PRAD | 28 | 0.20331 | noncoding | 110 | chr15 | 66860302 | 66867023 | + | 0.8402 | lnc-SMAD6-2 | 1 | -4.532 | -4.75 | -4.114 | 5 | noncoding | -0.309867497 | AHCLELTVSGTSAGQDRPHAYSMAISPR | AHCLELTVSGTSAGQDRPHAYSM[147]AISPR | LQNPPSHLGTQWLHEAKSWSLVYLGVGRAHCLELTVSGTSAGQDRPHAYSMAISPRAATSGSVFPIGQGACGRFKPLMASSPGSSVGLGSGSLTNLSKSLTSPGLSFLIC |
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