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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SLX1B-3:21 | OV | 25 | 0.784781 | coding | 75 | chr16 | 29259921 | 29330050 | + | 0.7454 | lnc-SLX1B-3 | 0.027 | -4.333 | -4.532 | -4.692 | 108 | coding | 0.799090326 | GLMDMLACEASRELMLGTGAVGEQR | n[145]GLMDM[147]LACEASRELMLGTGAVGEQR | LRSRGLMDMLACEASRELMLGTGAVGEQRREKPCLRGLTVGTEPPAQVPVSKTVDTCTPWHVEHQGLRCVCWQWL |
lnc-SLX1B-3:23 | EOGC | 10 | 0.999999 | coding | 327 | chr16 | 29259921 | 29381082 | + | 0.835 | lnc-SLX1B-3 | 1 | 10.346 | 8.811 | 9.398 | 1 | coding | 0.838309964 | VSPGHPGIAR | n[145]VSPGHPGIAR | LRHIASDVGRGRTWLRCALNEHSLERYLHMLLADRCRLSTFYEDWSFVMDEERSSMLPTMAAGPNSILFAINIDNKDLNGQSKFAPTVSDLLKESTQNVTLLKESTQGVSSVFREITASSAISILIKPEQETDPLPVVSRNVSADAKCKKERKKKKQVTNIISFDDEEDEQNSGDMFKKTPGAGESSEDNSDHSSVNIMSAFESPFGPNSNGSQSSNSWKIDSLSLNREFGYQKLDVKSIDDEDVDENEDDVYGNSSGRKHRGHSESPEKCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCDESPAAPCHPPRVSPGHPGIAR |
lnc-SLX1B-3:25 | HCC | 9 | 0.999949 | coding | 48 | chr16 | 29291219 | 29372110 | + | 0.5399 | lnc-SLX1B-3 | 0.47 | 0 | 0 | 0 | 1 | coding | 0.84095929 | VEGPPVISK | VEGPPVISK | LSWGVQDQPGQHNEISALLKIIIIKKKKNGPTFHWQGRVEGPPVISKS |
lnc-SLX1B-3:5 | BRCA-Luminal A | 15 | 1 | coding | 96 | chr16 | 29074975 | 29116718 | + | 0.7844 | lnc-SLX1B-3 | 1 | -3.558 | 10.198 | -4.788 | 1 | coding | 0.696953942 | LENHVATDEDEPALK | n[145]LENHVATDEDEPALK | LENHVATDEDEPALKCQRLEINCQDPSIKSFLYSINQTICLRLDSIEAKLQALEATCKSLEEKLDLVTNKQHSPIQVPMVAGSPLRTTQMCNKVRW |
lnc-SLX4IP-36:1 | OSCC | 18 | 0.0322739 | noncoding | 63 | chr20 | 10902283 | 10914535 | + | 0.7659 | lnc-SLX4IP-36 | 0.188 | -4.581 | 0 | -6.013 | 2 | noncoding | -0.354904186 | YSVWMDGNNSAGDLEALK | n[145]YSVWMDGNNSAGDLEALK | LLAKVGPYIMGAPFARMKYSVWMDGNNSAGDLEALKGSVANGQVIPGTCMSGGRPFLQTCTEL |
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