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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SLX1B-3:11 | BRCA-Luminal A | 10 | 0.00893045 | noncoding | 57 | chr16 | 29116126 | 29217860 | + | 0.7008 | lnc-SLX1B-3 | 0.034 | 0 | 0 | 0 | 3 | noncoding | -0.338074842 | SLHPAGVTHR | n[145]SLHPAGVTHR | LWYLHLSHNLQLSSTKGWTLVPPHGSREACCEVKEARHKSLHPAGVTHRTILEDAKL |
lnc-SLX1B-3:11 | BRCA-Luminal B | 10 | 0.00893045 | noncoding | 57 | chr16 | 29116126 | 29217860 | + | 0.7008 | lnc-SLX1B-3 | 0.034 | 0 | 0 | 0 | 3 | noncoding | -0.338074842 | SLHPAGVTHR | n[145]SLHPAGVTHR | LWYLHLSHNLQLSSTKGWTLVPPHGSREACCEVKEARHKSLHPAGVTHRTILEDAKL |
lnc-SLX1B-3:11 | BRCA-Basal-like | 10 | 0.00893045 | noncoding | 57 | chr16 | 29116126 | 29217860 | + | 0.7008 | lnc-SLX1B-3 | 0.034 | 0 | 0 | 0 | 3 | noncoding | -0.338074842 | SLHPAGVTHR | n[145]SLHPAGVTHR | LWYLHLSHNLQLSSTKGWTLVPPHGSREACCEVKEARHKSLHPAGVTHRTILEDAKL |
lnc-SLX1B-3:18 | OV | 17 | 0.533236 | coding | 137 | chr16 | 29154315 | 29333056 | + | 0.3768 | lnc-SLX1B-3 | 0.06 | 0 | 0 | 0 | 4 | coding | 0.787217738 | LCCQGMGALMGGSEGAK | n[145]LCCQGM[147]GALM[147]GGSEGAK | LCCQGMGALMGGSEGAKASQCEPQSRTGFPHHGNAQAWKGEGGAWGLHLLLRRISAAFALWRKHALPPPPPHPLQMVIFCTRMCMLMVVIFAQITLLEKGGFAPVYCHQTHKLACFLILDKKSDHWLNTPVRMVFTK |
lnc-SLX1B-3:18 | OV | 17 | 0.533236 | coding | 137 | chr16 | 29154315 | 29333056 | + | 0.3768 | lnc-SLX1B-3 | 0.06 | 0 | 0 | 0 | 4 | coding | 0.787217738 | LCCQGMGALMGGSEGAK | n[145]LCCQGMGALMGGSEGAK | LCCQGMGALMGGSEGAKASQCEPQSRTGFPHHGNAQAWKGEGGAWGLHLLLRRISAAFALWRKHALPPPPPHPLQMVIFCTRMCMLMVVIFAQITLLEKGGFAPVYCHQTHKLACFLILDKKSDHWLNTPVRMVFTK |
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