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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SMARCA2-6:1 | BRCA-Basal-like | 12 | 0.234072 | noncoding | 120 | chr9 | 2213893 | 2293037 | + | 0.9971 | lnc-SMARCA2-6 | 0.068 | 0 | 0 | 0 | 8 | noncoding | -0.311572284 | GTAEGHSRETGR | n[145]GTAEGHSRETGR | MRTGIPVFALKKLPFGLLRSLSCTHINLKPQAPGADQQMKRSRGTAEGHSRETGRGTFSWGWLERSLAAGQPNSRGRSSSHSIPHFRFPIHPAKSHLHHSTKPCVDPSSPCVTRYSRDAG |
lnc-SMARCA2-6:1 | BRCA-Luminal A | 12 | 0.234072 | noncoding | 120 | chr9 | 2213893 | 2293037 | + | 0.9971 | lnc-SMARCA2-6 | 0.068 | 0 | 0 | 0 | 8 | noncoding | -0.311572284 | GTAEGHSRETGR | n[145]GTAEGHSRETGR | MRTGIPVFALKKLPFGLLRSLSCTHINLKPQAPGADQQMKRSRGTAEGHSRETGRGTFSWGWLERSLAAGQPNSRGRSSSHSIPHFRFPIHPAKSHLHHSTKPCVDPSSPCVTRYSRDAG |
lnc-SMARCA2-6:1 | BRCA-HER2-enriched | 12 | 0.234072 | noncoding | 120 | chr9 | 2213893 | 2293037 | + | 0.9971 | lnc-SMARCA2-6 | 0.068 | 0 | 0 | 0 | 8 | noncoding | -0.311572284 | GTAEGHSRETGR | n[145]GTAEGHSRETGR | MRTGIPVFALKKLPFGLLRSLSCTHINLKPQAPGADQQMKRSRGTAEGHSRETGRGTFSWGWLERSLAAGQPNSRGRSSSHSIPHFRFPIHPAKSHLHHSTKPCVDPSSPCVTRYSRDAG |
lnc-SMARCA2-6:1 | BRCA-Luminal B | 12 | 0.234072 | noncoding | 120 | chr9 | 2213893 | 2293037 | + | 0.9971 | lnc-SMARCA2-6 | 0.068 | 0 | 0 | 0 | 8 | noncoding | -0.311572284 | GTAEGHSRETGR | n[145]GTAEGHSRETGR | MRTGIPVFALKKLPFGLLRSLSCTHINLKPQAPGADQQMKRSRGTAEGHSRETGRGTFSWGWLERSLAAGQPNSRGRSSSHSIPHFRFPIHPAKSHLHHSTKPCVDPSSPCVTRYSRDAG |
lnc-SMARCA2-6:1 | OSCC | 12 | 0.234072 | noncoding | 120 | chr9 | 2213893 | 2293037 | + | 0.824 | lnc-SMARCA2-6 | 0.068 | 0 | 0 | 0 | 37 | noncoding | -0.311572284 | GTAEGHSRETGR | n[145]GTAEGHSRETGR | MRTGIPVFALKKLPFGLLRSLSCTHINLKPQAPGADQQMKRSRGTAEGHSRETGRGTFSWGWLERSLAAGQPNSRGRSSSHSIPHFRFPIHPAKSHLHHSTKPCVDPSSPCVTRYSRDAG |
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