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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SMAD6-2:8 | PRAD | 12 | 0.354601 | noncoding | 33 | chr15 | 66842568 | 66847595 | + | 0.8431 | lnc-SMAD6-2 | 0.061 | -5.855 | -3.616 | -4.104 | 3 | noncoding | -0.360846589 | LSDCMNLEELLK | LSDCM[147]NLEELLK | LSDCMNLEELLKRSELPFPYLAKYTGSTNSYES |
lnc-SMAD6-2:8 | PRAD | 12 | 0.354601 | noncoding | 33 | chr15 | 66842568 | 66847595 | + | 0.8431 | lnc-SMAD6-2 | 0.061 | -5.855 | -3.616 | -4.104 | 3 | noncoding | -0.360846589 | LSDCMNLEELLK | LSDCMNLEELLK | LSDCMNLEELLKRSELPFPYLAKYTGSTNSYES |
lnc-SMAD7-1:1 | CRC | 14 | 0.395606 | noncoding | 60 | chr18 | 48959509 | 48965137 | - | 0.6707 | lnc-SMAD7-1 | 0.042 | 0 | 0 | 0 | 1 | noncoding | -0.407114251 | VYCICNYAASNCCK | VYCICNYAASNCCK | MHRVYCICNYAASNCCKGTSGKDCPSSQCVCVYVHVIHVHIMKITYMYNCIIYIYNCIRI |
lnc-SMAD7-1:2 | EOGC | 11 | 0.0110286 | noncoding | 87 | chr18 | 48962950 | 48963941 | - | 0.9931 | lnc-SMAD7-1 | 0.213 | -3.412 | -4.026 | -5.237 | 1 | noncoding | -0.405012655 | MQPAEIPQLGS | n[145]MQPAEIPQLGS | LYFSCWGGIYSASPVLLHLQGQWRTPGDSWLRSRINVKEFLHRLHHQILLNMLCPFQEKKRNECELFLYIQPFTQKMQPAEIPQLGS |
lnc-SMAD7-1:3 | BRCA-Luminal A | 16 | 0.141795 | noncoding | 38 | chr18 | 48961067 | 48976543 | - | 0.9995 | lnc-SMAD7-1 | 0.164 | -3.137 | -4.032 | -4.191 | 94 | noncoding | -0.369366693 | HAPIPKPMSSGSSSWK | n[145]HAPIPKPMSSGSSSWK | MGIGQWGLRPYLPREGEDLGRHAPIPKPMSSGSSSWKS |
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