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The Maher Lab

McDonnell Genome Institute

Washington University School of Medicine in St. Louis

PepTransDB

The Maher Lab | Washington University

LncRNA Peptides

CircRNA Peptides

lncRNA Peptides

Use criteria below to search among 19,871 unique lncRNA peptides:

*Click Transcript to view full ORF and comprehensive information in new page.

Transcript*	Cancer	Peptide Length	CPC Coding Probability	CPC Label	ORF Length	Chromosome	Start	End	Strand	Max Probability	Gene Name	Conservation Score	PhyloCSF Frame 1	PhyloCSF Frame 2	PhyloCSF Frame 3	No. of Spectra	CNTI Index	CNTI Score	Peptide	Modified Peptide	ORF
lnc-SMC5-6:1	EOGC	9	0.0479449	noncoding	94	chr9	70217194	70217668	+	0.6734	lnc-SMC5-6	1	-4.035	1.744	-3.41	1	noncoding	-0.327059548	GESEEIQKK	n[145]GESEEIQKK	LCSFSGYKIYPGQGRHYARTDGKVFEFLNAKCESAFLSKRNPWQINWTVLHRRKHKKGESEEIQKKRTHPAVKFQRAITGASLADIMAKRNQKP
lnc-SMC5-6:1	EOGC	7	0.0479449	noncoding	94	chr9	70217194	70217668	+	0.962	lnc-SMC5-6	1	-4.035	1.744	-3.41	11	noncoding	-0.327059548	IYPGQGR	n[145]IYPGQGR	LCSFSGYKIYPGQGRHYARTDGKVFEFLNAKCESAFLSKRNPWQINWTVLHRRKHKKGESEEIQKKRTHPAVKFQRAITGASLADIMAKRNQKP
lnc-SMC5-6:1	EOGC	9	0.0479449	noncoding	94	chr9	70217194	70217668	+	0.4361	lnc-SMC5-6	1	-4.035	1.744	-3.41	2	noncoding	-0.327059548	KGESEEIQK	n[145]KGESEEIQK	LCSFSGYKIYPGQGRHYARTDGKVFEFLNAKCESAFLSKRNPWQINWTVLHRRKHKKGESEEIQKKRTHPAVKFQRAITGASLADIMAKRNQKP
lnc-SMC5-6:1	EOGC	8	0.0479449	noncoding	94	chr9	70217194	70217668	+	0.9948	lnc-SMC5-6	1	-4.035	1.744	-3.41	128	noncoding	-0.327059548	VFEFLNAK	n[145]VFEFLNAK	LCSFSGYKIYPGQGRHYARTDGKVFEFLNAKCESAFLSKRNPWQINWTVLHRRKHKKGESEEIQKKRTHPAVKFQRAITGASLADIMAKRNQKP
lnc-SMC5-6:1	HCC	8	0.0479449	noncoding	94	chr9	70217194	70217668	+	0.9995	lnc-SMC5-6	1	-4.035	1.744	-3.41	13	noncoding	-0.327059548	GESEEIQK	n[230]GESEEIQK	LCSFSGYKIYPGQGRHYARTDGKVFEFLNAKCESAFLSKRNPWQINWTVLHRRKHKKGESEEIQKKRTHPAVKFQRAITGASLADIMAKRNQKP

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