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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SMTN-2:2 | PRAD | 17 | 0.228485 | noncoding | 145 | chr22 | 31051629 | 31068327 | + | 0.1287 | lnc-SMTN-2 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.32855431 | QLDDPPPTFQGSWLVLR | LPAAHKQLDDPPPTFQGSWLVLRAPKSFLWLKVQPIKKGGPHALKLGVGNGQSQSRVGAEGVIKARVGGVEMESASWPETKSQIPGSFQRTMNVLVRLCLNPKAGELSRPMKSCQEEKIPPQCGLPYPHLPWCPEKLPFPLLAST | |
lnc-SMTN-2:2 | PRAD | 8 | 0.228485 | noncoding | 145 | chr22 | 31051629 | 31068327 | + | 0.9956 | lnc-SMTN-2 | 1 | 0 | 0 | 0 | 10 | noncoding | -0.32855431 | VGAEGVIK | LPAAHKQLDDPPPTFQGSWLVLRAPKSFLWLKVQPIKKGGPHALKLGVGNGQSQSRVGAEGVIKARVGGVEMESASWPETKSQIPGSFQRTMNVLVRLCLNPKAGELSRPMKSCQEEKIPPQCGLPYPHLPWCPEKLPFPLLAST | |
lnc-SMTN-4:1 | CCRC | 14 | 0.0623815 | noncoding | 46 | chr22 | 30902218 | 30902781 | + | 1 | lnc-SMTN-4 | 1 | 0 | 0 | 0 | 23 | noncoding | -0.40518858 | GFCYIEFDEVDSLK | n[230]GFCYIEFDEVDSLK | MVQGDIDAIFKDLSIRSVRVVRDKDTDKFKGFCYIEFDEVDSLKEA |
lnc-SMTN-4:1 | CCRC | 11 | 0.0623815 | noncoding | 46 | chr22 | 30902218 | 30902781 | + | 0.2094 | lnc-SMTN-4 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.40518858 | MVQGDIDAIFK | M[147]VQGDIDAIFK | MVQGDIDAIFKDLSIRSVRVVRDKDTDKFKGFCYIEFDEVDSLKEA |
lnc-SMTN-4:1 | EOGC | 14 | 0.0623815 | noncoding | 46 | chr22 | 30902218 | 30902781 | + | 0.9289 | lnc-SMTN-4 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.40518858 | GFCYIEFDEVDSLK | n[145]GFCYIEFDEVDSLK | MVQGDIDAIFKDLSIRSVRVVRDKDTDKFKGFCYIEFDEVDSLKEA |
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