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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SMOC2-8:4 | OSCC | 12 | 0.48971 | noncoding | 177 | chr6 | 169158341 | 169175379 | + | 0.967 | lnc-SMOC2-8 | 0.903 | 0 | 0 | 0 | 25 | noncoding | -0.287943491 | VTATPGTEPGLR | n[145]VTATPGTEPGLR | MGGFPGKLSTSFRSHPSSVSAHHDRVTATPGTEPGLRAAGNRRIFYPGPEQARSSLNCSVASKCEDAVSQVSHVTKRTSWAHGECLYGTVWKQAASQQLQRLQGLVFTNTRSVRDRRRGGTCRTWWGSSLNTSAHTWVCVSQRISALSAHTWLPCPPTPPTPQSTLPHTYSCPESSR |
lnc-SMOC2-8:4 | OV | 24 | 0.48971 | noncoding | 50 | chr6 | 169158341 | 169175379 | + | 0.8397 | lnc-SMOC2-8 | 0.018 | -4.595 | -3.909 | -5.019 | 4 | noncoding | -0.287943491 | MEVLGSLNNINVAEHLVHGQTCSR | n[145]MEVLGSLNNINVAEHLVHGQTCSR | MEVLGSLNNINVAEHLVHGQTCSRYSIKEAICIFCFKFYSMVNVCLLSQM |
lnc-SMOC2-8:4 | OV | 24 | 0.48971 | noncoding | 50 | chr6 | 169158341 | 169175379 | + | 0.8397 | lnc-SMOC2-8 | 0.018 | -4.595 | -3.909 | -5.019 | 4 | noncoding | -0.287943491 | MEVLGSLNNINVAEHLVHGQTCSR | n[145]M[147]EVLGSLNNINVAEHLVHGQTCSR | MEVLGSLNNINVAEHLVHGQTCSRYSIKEAICIFCFKFYSMVNVCLLSQM |
lnc-SMPD3-3:1 | HCC | 9 | 0.0182069 | noncoding | 63 | chr16 | 68477236 | 68477570 | - | 0.9999 | lnc-SMPD3-3 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.434046716 | NNTVTPGCK | n[230]NNTVTPGCK | LGKRCTYVYKAKNNTVTPGCKQNKTRAIWGKVTQAHGNSGMFRAKFQRNLPAKAGSLSWGHRI |
lnc-SMTN-2:2 | OV | 7 | 0.228485 | noncoding | 33 | chr22 | 31051629 | 31068327 | + | 0.7135 | lnc-SMTN-2 | 0.767 | -5.638 | -5.322 | 0 | 2 | noncoding | -0.32855431 | MELENPR | n[145]MELENPR | MELENPRQWIRAPEIMDLDSGSGPDSSSCWARS |
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