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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SMIM9-2:3 | LUAD | 11 | 0.410901 | noncoding | 100 | chrX | 154816336 | 154817512 | - | 0.5707 | lnc-SMIM9-2 | 1 | -4.064 | -4.152 | 0 | 2 | coding | 0.675009412 | EDLPAVNRETK | n[230]EDLPAVNRETK | MPKRKVSSTKGAAKEEPKRRSARLSAKPPAKVEVKPKKAAAKDKSSDKKVQTKGKRRAKGKQAEVANQETKEDLPAVNRETKTEESPASDEAGEKEAKSD |
lnc-SMKR1-2:2 | HCC | 19 | 0.096832 | noncoding | 75 | chr7 | 129477874 | 129478101 | + | 0.5046 | lnc-SMKR1-2 | 1 | 0 | 0 | 0 | 2 | noncoding | -0.399632586 | HVQGILWGFDPLMNLVIDK | HVQGILWGFDPLMNLVIDK | MSKAHPPELKKFIDKKLSLKLNGGRHVQGILWGFDPLMNLVIDKCVEMATSGQQKNIGMVVIRRNSIIMLETLEQ |
lnc-SMKR1-2:2 | HCC | 9 | 0.096832 | noncoding | 75 | chr7 | 129477874 | 129478101 | + | 0.9083 | lnc-SMKR1-2 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.399632586 | NIGMVVIRR | n[230]NIGM[147]VVIRR | MSKAHPPELKKFIDKKLSLKLNGGRHVQGILWGFDPLMNLVIDKCVEMATSGQQKNIGMVVIRRNSIIMLETLEQ |
lnc-SMNDC1-1:1 | OV | 15 | 0.230389 | noncoding | 67 | chr10 | 110207849 | 110208591 | - | 0.9968 | lnc-SMNDC1-1 | 1 | 6.584 | -0.436 | 1.078 | 7 | noncoding | -0.359382026 | KVLMCFSIEFSLVLK | n[145]KVLMCFSIEFSLVLK | LAASSRICTFCRKVLMCFSIEFSLVLKMSEKGHLGLAPAGSSGRAGGWGAATAGGTAGGAAGASPAP |
lnc-SMNDC1-6:1 | EOGC | 11 | 0.0581872 | noncoding | 62 | chr10 | 110550114 | 110550854 | - | 0.9993 | lnc-SMNDC1-6 | 1 | 0 | 0 | 0 | 17 | noncoding | -0.369822047 | AGNFCVPAEPK | n[145]AGNFCVPAEPK | MARMARKAGNFCVPAEPKLALIIRIRGLSGGSPRVRKVWQLLCLVRSSSETLLSSTVLQFTC |
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