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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SNAPC3-4:1 | BRCA-Luminal B | 9 | 0.285703 | noncoding | 86 | chr9 | 15588354 | 15588615 | + | 0.4983 | lnc-SNAPC3-4 | 1 | 0 | 0 | 0 | 3 | noncoding | -0.331649885 | NPAGNGDAK | n[145]NPAGNGDAK | MPKRKPEGDATGDKAKLQRRSARLSAKPAPSKPERKPKKPSLPLQRREKRYPKGKADAYKEGKNPAGNGDAKTDQAQEAQRAGDAK |
lnc-SNAPC3-4:1 | BRCA-Luminal A | 14 | 0.285703 | noncoding | 86 | chr9 | 15588354 | 15588615 | + | 0.4439 | lnc-SNAPC3-4 | 1 | 0 | 0 | 0 | 2 | noncoding | -0.331649885 | TDQAQEAQRAGDAK | n[145]TDQAQEAQRAGDAK | MPKRKPEGDATGDKAKLQRRSARLSAKPAPSKPERKPKKPSLPLQRREKRYPKGKADAYKEGKNPAGNGDAKTDQAQEAQRAGDAK |
lnc-SNAPC3-4:1 | HCC | 9 | 0.285703 | noncoding | 86 | chr9 | 15588354 | 15588615 | + | 0.5846 | lnc-SNAPC3-4 | 1 | 0 | 0 | 0 | 4 | noncoding | -0.331649885 | NPAGNGDAK | n[230]NPAGNGDAK | MPKRKPEGDATGDKAKLQRRSARLSAKPAPSKPERKPKKPSLPLQRREKRYPKGKADAYKEGKNPAGNGDAKTDQAQEAQRAGDAK |
lnc-SNAPC3-4:1 | OSCC | 9 | 0.285703 | noncoding | 86 | chr9 | 15588354 | 15588615 | + | 0.9572 | lnc-SNAPC3-4 | 1 | 0 | 0 | 0 | 42 | noncoding | -0.331649885 | NPAGNGDAK | n[145]NPAGNGDAK | MPKRKPEGDATGDKAKLQRRSARLSAKPAPSKPERKPKKPSLPLQRREKRYPKGKADAYKEGKNPAGNGDAKTDQAQEAQRAGDAK |
lnc-SNAPC3-8:2 | CCRC | 8 | 0.0994009 | noncoding | 51 | chr9 | 14593576 | 14594200 | + | 0.9999 | lnc-SNAPC3-8 | 1 | 0 | 0 | 0 | 17 | noncoding | -0.33311044 | IFENLENK | IFENLENK | MDSPQANRGSFQKLLDKIFENLENKNPSSMEKLFSDVDSSYYDLVTVQWAW |
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