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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SLCO4A1-AS1:7 | OV | 7 | 0.328749 | noncoding | 152 | chr20 | 62657140 | 62666648 | - | 0.4634 | SLCO4A1-AS1 | 1 | 11.998 | -4.284 | -4.588 | 2 | noncoding | -0.30198564 | QWHLGQR | n[145]QWHLGQR | MGTAVKKAAAPEPRKPTHQAPTHSGLSVVSSVLWKRQWHLGQRAAHLCPPWHTHWGLLAPPPGRPPGSVCTLVNTGPWCCWPQVLSLPCRLKQTPPWLSCPPRQMAPCLGPRSRAGDATCGLVLRPRWGWALRGAASPGNSGRRHPSPQCRG |
SLCO4A1-AS1:7 | OV | 17 | 0.328749 | noncoding | 152 | chr20 | 62657140 | 62666648 | - | 0.9071 | SLCO4A1-AS1 | 1 | 11.998 | -4.284 | -4.588 | 1 | noncoding | -0.30198564 | WGWALRGAASPGNSGRR | n[145]WGWALRGAASPGNSGRR | MGTAVKKAAAPEPRKPTHQAPTHSGLSVVSSVLWKRQWHLGQRAAHLCPPWHTHWGLLAPPPGRPPGSVCTLVNTGPWCCWPQVLSLPCRLKQTPPWLSCPPRQMAPCLGPRSRAGDATCGLVLRPRWGWALRGAASPGNSGRRHPSPQCRG |
SMAD1-AS1:1 | OV | 14 | 0.293996 | noncoding | 85 | chr4 | 145514577 | 145517194 | - | 0.8481 | SMAD1-AS1 | 1 | 10.933 | -3.982 | -4.535 | 5 | noncoding | -0.390712995 | GMVTQLLGCPGQLK | n[145]GM[147]VTQLLGCPGQLK | LPSRERGMVTQLLGCPGQLKAFSSSSMAPFFFFSFFTKASTAFSAHFSSSSPCFHPRSLFTAGLVKENKLVTFIMTALVILLGYG |
SMAD1-AS2:4 | BRCA-Luminal B | 7 | 0.233348 | noncoding | 45 | chr4 | 145494860 | 145502971 | - | 0.9995 | SMAD1-AS2 | 0.673 | -5.074 | -5.471 | -4.763 | 7 | noncoding | -0.334014506 | FEPLLVK | n[145]FEPLLVK | LSISGLLRFEPLLVKGQLYSKTIKSHPYIILITTTTTIMNHHALF |
SMAD1-AS2:4 | BRCA-HER2-enriched | 7 | 0.233348 | noncoding | 45 | chr4 | 145494860 | 145502971 | - | 0.9995 | SMAD1-AS2 | 0.673 | -5.074 | -5.471 | -4.763 | 7 | noncoding | -0.334014506 | FEPLLVK | n[145]FEPLLVK | LSISGLLRFEPLLVKGQLYSKTIKSHPYIILITTTTTIMNHHALF |
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