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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SNX10-2:9 | OV | 14 | 0.0968707 | noncoding | 86 | chr7 | 26403395 | 26496362 | + | 0.6496 | lnc-SNX10-2 | 1 | 0 | -2.489 | 0 | 1 | noncoding | -0.332936517 | TDTSTHIPISSHLR | n[145]TDTSTHIPISSHLR | LKAGFPWKPAAHPPAPLPCLLQPPLKHCRGLAALQGRVKTDTSTHIPISSHLRRLNAFFPCFTLLGFSSPCFFFLYISYKKKKRSY |
lnc-SNX10-4:1 | HCC | 14 | 0.0641255 | noncoding | 56 | chr7 | 26276194 | 26276606 | + | 0.8824 | lnc-SNX10-4 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.398714469 | DEMKGSAITGPVAK | n[230]DEMKGSAITGPVAK | LTTKVIWRKDGVFLYFEGNAGVIIKNKDEMKGSAITGPVAKECADLWPRIAFNTGS |
lnc-SNX10-4:1 | HCC | 12 | 0.0641255 | noncoding | 48 | chr7 | 26276194 | 26276606 | + | 0.1242 | lnc-SNX10-4 | 1 | -4.743 | -4.111 | -4.002 | 2 | noncoding | -0.398714469 | SKQGCGESSGAK | n[43]SKQGCGESSGAK | MSKQGCGESSGAKFWISLGLLVGSLINNADNTGAKNLYIISVKRIRDG |
lnc-SNX11-6:1 | LUAD | 7 | 0.115677 | noncoding | 93 | chr17 | 48126748 | 48129332 | + | 0.9965 | lnc-SNX11-6 | 1 | -2.13 | -3.072 | -0.995 | 10 | coding | 0.618410403 | MPGHQEK | n[230]M[147]PGHQEK | MSSLRTSTRSLLEHFCYGRQGSGILLPGATKMLPSVALCQLEGWWTVMGTHEGTECTQPPTAGQPHRQLDAKDTRPLRMPGHQEKKAQLAGSA |
lnc-SNX12-1:1 | OV | 14 | 0.120391 | noncoding | 56 | chrX | 71043213 | 71045470 | - | 0.4708 | lnc-SNX12-1 | 1 | 0 | 0 | 0 | 6 | noncoding | -0.385900798 | VMDRYESEALLEGK | n[145]VMDRYESEALLEGK | LLQTTGNPCYWRVMDRYESEALLEGKCEDTFLLRDAGQRDCLFSMNFWGYNRSLQA |
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