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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SOCS5-1:1 | BRCA-HER2-enriched | 11 | 0.0517315 | noncoding | 47 | chr2 | 46777782 | 46780245 | + | 0.9988 | lnc-SOCS5-1 | 0.372 | -4.439 | -5.032 | -2.318 | 37 | noncoding | -0.322320275 | LASGLTAILWR | n[145]LASGLTAILWR | LASGLTAILWRKYEFPISTKKVRLRGKGSCSRFALEQSQDSHSDLRL |
lnc-SOCS5-1:1 | BRCA-Luminal A | 11 | 0.0517315 | noncoding | 47 | chr2 | 46777782 | 46780245 | + | 0.9988 | lnc-SOCS5-1 | 0.372 | -4.439 | -5.032 | -2.318 | 37 | noncoding | -0.322320275 | LASGLTAILWR | n[145]LASGLTAILWR | LASGLTAILWRKYEFPISTKKVRLRGKGSCSRFALEQSQDSHSDLRL |
lnc-SOCS5-1:1 | BRCA-Basal-like | 11 | 0.0517315 | noncoding | 47 | chr2 | 46777782 | 46780245 | + | 0.9988 | lnc-SOCS5-1 | 0.372 | -4.439 | -5.032 | -2.318 | 37 | noncoding | -0.322320275 | LASGLTAILWR | n[145]LASGLTAILWR | LASGLTAILWRKYEFPISTKKVRLRGKGSCSRFALEQSQDSHSDLRL |
lnc-SOCS5-1:1 | OV | 15 | 0.0517315 | noncoding | 77 | chr2 | 46777782 | 46780245 | + | 0.6465 | lnc-SOCS5-1 | 0.777 | -3.153 | -4.539 | -5.156 | 1 | noncoding | -0.322320275 | IESKPREMVGGSRGR | n[145]IESKPREM[147]VGGSRGR | MEVTGAVNICRQPYPELRGERTDWNSSFLFHSPTLFAFGLARRIESKPREMVGGSRGRWEGNSRMSYGQPKEAVEIK |
lnc-SOCS5-1:1 | OV | 11 | 0.0517315 | noncoding | 77 | chr2 | 46777782 | 46780245 | + | 0.5204 | lnc-SOCS5-1 | 0.777 | -3.153 | -4.539 | -5.156 | 4 | noncoding | -0.322320275 | MEVTGAVNICR | n[145]MEVTGAVNICR | MEVTGAVNICRQPYPELRGERTDWNSSFLFHSPTLFAFGLARRIESKPREMVGGSRGRWEGNSRMSYGQPKEAVEIK |
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