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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SNX31-1:1 | LUAD | 18 | 0.160354 | noncoding | 100 | chr8 | 100550527 | 100559643 | - | 0.9999 | lnc-SNX31-1 | 1 | -1.98 | -3.568 | -1.496 | 4 | noncoding | -0.311260573 | LVINGNPITIFQEQDPTK | n[230]LVINGNPITIFQEQDPTK | LFFVTFHGIRNWLQNIISISTHGKFHHTVKAENGKLVINGNPITIFQEQDPTKIKWGDAEAEYAVESTGIFMTIEKAGAHLMGEPKGSSSLPPLLMPPYS |
lnc-SNX31-1:1 | OSCC | 10 | 0.160354 | noncoding | 100 | chr8 | 100550527 | 100559643 | - | 0.2711 | lnc-SNX31-1 | 1 | -1.98 | -3.568 | -1.496 | 1 | noncoding | -0.311260573 | AGAHLMGEPK | n[145]AGAHLM[147]GEPK | LFFVTFHGIRNWLQNIISISTHGKFHHTVKAENGKLVINGNPITIFQEQDPTKIKWGDAEAEYAVESTGIFMTIEKAGAHLMGEPKGSSSLPPLLMPPYS |
lnc-SNX31-1:1 | OSCC | 14 | 0.160354 | noncoding | 100 | chr8 | 100550527 | 100559643 | - | 0.7584 | lnc-SNX31-1 | 1 | -1.98 | -3.568 | -1.496 | 1 | noncoding | -0.311260573 | GSSSLPPLLMPPYS | n[145]GSSSLPPLLMPPYS | LFFVTFHGIRNWLQNIISISTHGKFHHTVKAENGKLVINGNPITIFQEQDPTKIKWGDAEAEYAVESTGIFMTIEKAGAHLMGEPKGSSSLPPLLMPPYS |
lnc-SNX31-1:3 | HCC | 7 | 0.0326234 | noncoding | 120 | chr8 | 100550723 | 100551713 | - | 0.6466 | lnc-SNX31-1 | 1 | -1.98 | -4.135 | -1.496 | 15 | coding | 0.654393543 | AAFNSSK | n[230]AAFNSSK | LGHIGHLVTRAAFNSSKVDIVTINDPSLTSTTWSACSSISTHGKFHHTVKAENGKLVINGNPITIFQEQDPTKIKWGDAEAEYAVESTGIFMTIEKAGAHLMGEPKGSSSLPPLLMPPYS |
lnc-SNX7-6:1 | OV | 17 | 0.0361623 | noncoding | 58 | chr1 | 98076999 | 98077468 | + | 0.749 | lnc-SNX7-6 | 1 | -5.649 | -6.107 | -5.981 | 12 | noncoding | -0.396937547 | TIDFPTPAAAFYSLLAK | n[145]TIDFPTPAAAFYSLLAK | LKFIRGKPILETRTIDFPTPAAAFYSLLAKQLFRMEGVKNVFFSPDFIAFTSESEDVD |
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