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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SOX4-3:1 | EOGC | 28 | 0.0379161 | noncoding | 49 | chr6 | 21602127 | 21602383 | + | 0.2586 | lnc-SOX4-3 | 0.997 | 0 | 0 | 0 | 3 | noncoding | -0.333314698 | LVNACLAEALLRIHAFEQKTLIPEQWAR | n[145]LVNACLAEALLRIHAFEQKTLIPEQWAR | LAVSAKFEGKPLLQRHRLVNACLAEALLRIHAFEQKTLIPEQWARERQK |
lnc-SOX4-3:1 | EOGC | 9 | 0.0379161 | noncoding | 49 | chr6 | 21602127 | 21602383 | + | 0.463 | lnc-SOX4-3 | 0.997 | 0 | 0 | 0 | 2 | noncoding | -0.333314698 | TLIPEQWAR | n[145]TLIPEQWAR | LAVSAKFEGKPLLQRHRLVNACLAEALLRIHAFEQKTLIPEQWARERQK |
lnc-SOX5-5:1 | PRAD | 8 | 0.528585 | coding | 49 | chr12 | 24558494 | 24563142 | - | 0.9963 | lnc-SOX5-5 | 1 | -2.971 | -2.898 | -3.432 | 1 | coding | 0.659551562 | QSPTLGAR | MQSPTLGARQSRHSGWQSTVLSYKSLGICWNPLEILTYPDSQRTLSRKA | |
lnc-SOX7-7:1 | OV | 9 | 0.0411755 | noncoding | 41 | chr8 | 10803077 | 10804810 | - | 0.4061 | lnc-SOX7-7 | 0.769 | 0 | -4.278 | -3.456 | 2 | noncoding | -0.378770691 | ELSFSFLLK | n[145]ELSFSFLLK | MKELSFSFLLKSRHIIHYTKSYTKFTFIVNLFSTEKEYFSV |
lnc-SOX7-7:1 | OV | 12 | 0.0411755 | noncoding | 41 | chr8 | 10803077 | 10804810 | - | 0.8881 | lnc-SOX7-7 | 0.769 | 0 | -4.278 | -3.456 | 1 | noncoding | -0.378770691 | FTFIVNLFSTEK | n[145]FTFIVNLFSTEK | MKELSFSFLLKSRHIIHYTKSYTKFTFIVNLFSTEKEYFSV |
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