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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SOX11-6:1 | EOGC | 8 | 0.0787752 | noncoding | 120 | chr2 | 5850137 | 5920353 | + | 0.9979 | lnc-SOX11-6 | 0.08 | -5.26 | -5.056 | -2.946 | 6 | noncoding | -0.355804829 | VAFQLNLK | n[145]VAFQLNLK | LDGNKKLLSSGLQHIYSKYTALFALRMILLMRSFQSRGTYEMWFSKLTMPNSTSCVIKVADKVSSTFRRAVNCFYLRRIRDGIMKKVAFQLNLKIVNKVVRGKGNPGTENRKSEVKEKGK |
lnc-SOX11-6:1 | OV | 10 | 0.0787752 | noncoding | 105 | chr2 | 5850137 | 5920353 | + | 0.7838 | lnc-SOX11-6 | 0.05 | -4.062 | -4.053 | -4.872 | 1 | noncoding | -0.355804829 | EGSQLVCVYR | n[145]EGSQLVCVYR | LRCSQHGSCVLRQEAEAGSPNRQVSLLPYSTGLGITTPAKIQEDTQASQNLREGSQLVCVYRGLPSLRYVSQMLHGVFISHHDFYHIFICFSCLNISNLYSTIAF |
lnc-SOX11-6:1 | OV | 12 | 0.0787752 | noncoding | 105 | chr2 | 5850137 | 5920353 | + | 0.7642 | lnc-SOX11-6 | 0.05 | -4.062 | -4.053 | -4.872 | 2 | noncoding | -0.355804829 | IQEDTQASQNLR | n[145]IQEDTQASQNLR | LRCSQHGSCVLRQEAEAGSPNRQVSLLPYSTGLGITTPAKIQEDTQASQNLREGSQLVCVYRGLPSLRYVSQMLHGVFISHHDFYHIFICFSCLNISNLYSTIAF |
lnc-SOX11-6:1 | PRAD | 24 | 0.0787752 | noncoding | 35 | chr2 | 5850137 | 5920353 | + | 0.794 | lnc-SOX11-6 | 0.104 | 0 | 0 | 0 | 4 | noncoding | -0.355804829 | CGIISEALSCSIGLYLCFGTSTMR | CGIISEALSCSIGLYLCFGTSTMR | MCGIISEALSCSIGLYLCFGTSTMRFWLLYPCIIV |
lnc-SOX11-6:1 | PRAD | 24 | 0.0787752 | noncoding | 35 | chr2 | 5850137 | 5920353 | + | 0.794 | lnc-SOX11-6 | 0.104 | 0 | 0 | 0 | 4 | noncoding | -0.355804829 | CGIISEALSCSIGLYLCFGTSTMR | CGIISEALSCSIGLYLCFGTSTM[147]R | MCGIISEALSCSIGLYLCFGTSTMRFWLLYPCIIV |
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