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PepTransDB

The Maher Lab | Washington University

lncRNA Peptides

Use criteria below to search among 19,871 unique lncRNA peptides:

*Click Transcript to view full ORF and comprehensive information in new page. 

Transcript*
Cancer
Peptide Length
CPC Coding Probability
CPC Label
ORF Length
Chromosome
Start
End
Strand
Max Probability
Gene Name
Conservation Score
PhyloCSF Frame 1
PhyloCSF Frame 2
PhyloCSF Frame 3
No. of Spectra
CNTI Index
CNTI Score
Peptide
Modified Peptide
ORF
lnc-SPARCL1-1:6
OV
9
0.133268
noncoding
42
chr4
87566695
87732414
-
0.1683
lnc-SPARCL1-1
0.093
-5.552
-5.231
-5.331
1
noncoding
-0.401637157
TISNMMILK
n[145]TISNMMILK
LSSFISNILETNIVIKNEAIVKEDQENDFKTISNMMILKVGH
lnc-SPAST-1:1
CCRC
12
0.91342
coding
146
chr2
32201599
32203999
+
0.9826
lnc-SPAST-1
1
0
0
0
13
coding
0.632678025
SVTEIAMNPHIK
n[230]SVTEIAMNPHIK
MTQKAAASVEHLAIRCHWSQRPAVTGDVLQVYSGSEGTAIIFCETQRSVTEIAMNPHIKQNAQCLHGDIAQSQREFTLKDFREGSFKVLVATNVAACGLDIPEVDLVIHGSPPQDVESISIVLDAQVELDRQGFVYVFINQEKEVN
lnc-SPAST-1:1
EOGC
11
0.91342
coding
98
chr2
32201599
32203999
+
0.6193
lnc-SPAST-1
1
0
0
0
4
coding
0.632678025
DLLNEILMNMK
n[145]DLLNEILM[147]NMK
LDAPKTKKIKMKEKLNGDTEEGFNRLSDEFSKSHKSRRKDLLNEILMNMKKKKQVSSLDSSTHESSDKKLEETLTHEQKEGTFSNLPISEETIKLLKG
lnc-SPAST-1:1
EOGC
11
0.91342
coding
98
chr2
32201599
32203999
+
0.6193
lnc-SPAST-1
1
0
0
0
4
coding
0.632678025
DLLNEILMNMK
n[145]DLLNEILM[147]NM[147]K
LDAPKTKKIKMKEKLNGDTEEGFNRLSDEFSKSHKSRRKDLLNEILMNMKKKKQVSSLDSSTHESSDKKLEETLTHEQKEGTFSNLPISEETIKLLKG
lnc-SPAST-1:1
EOGC
12
0.91342
coding
98
chr2
32201599
32203999
+
0.6315
lnc-SPAST-1
1
0
0
0
3
coding
0.632678025
DLLNEILMNMKK
n[145]DLLNEILM[147]NMKK
LDAPKTKKIKMKEKLNGDTEEGFNRLSDEFSKSHKSRRKDLLNEILMNMKKKKQVSSLDSSTHESSDKKLEETLTHEQKEGTFSNLPISEETIKLLKG
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