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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SPATA32-2:7 | OV | 21 | 0.0764486 | noncoding | 99 | chr17 | 45213084 | 45221777 | - | 0.8952 | lnc-SPATA32-2 | 0.995 | 0 | 0 | 0 | 1 | noncoding | -0.280898321 | LCAVAHANNPSTLGGQGERPR | n[145]LCAVAHANNPSTLGGQGERPR | MENYAAVKKKNNKDAKKNGKIFRIYFETKMWYRLCAVAHANNPSTLGGQGERPRQEDHLSPGVQDQPGQHNETSVSTESEKKKKDSMVVYECSPIYSGS |
lnc-SPATA32-2:7 | OV | 28 | 0.0764486 | noncoding | 99 | chr17 | 45213084 | 45221777 | - | 0.3374 | lnc-SPATA32-2 | 0.995 | 0 | 0 | 0 | 1 | noncoding | -0.280898321 | QEDHLSPGVQDQPGQHNETSVSTESEKK | n[145]QEDHLSPGVQDQPGQHNETSVSTESEKK | MENYAAVKKKNNKDAKKNGKIFRIYFETKMWYRLCAVAHANNPSTLGGQGERPRQEDHLSPGVQDQPGQHNETSVSTESEKKKKDSMVVYECSPIYSGS |
lnc-SPATA32-4:4 | OV | 20 | 0.103381 | noncoding | 80 | chr17 | 45245185 | 45248339 | - | 0.7253 | lnc-SPATA32-4 | 1 | -2.383 | -1.759 | -2.205 | 2 | noncoding | -0.308889822 | GAHQRPLQLGAGALAAQTAR | n[145]GAHQRPLQLGAGALAAQTAR | LRLSPGCGGWGALPRGARLLPRGAHQRPLQLGAGALAAQTARSRHPPQVRAARTLRFLTWRGWRSRNAGHEAQPRAPASA |
lnc-SPATA32-4:4 | OV | 22 | 0.103381 | noncoding | 80 | chr17 | 45245185 | 45248339 | - | 0.1827 | lnc-SPATA32-4 | 1 | -2.383 | -1.759 | -2.205 | 1 | noncoding | -0.308889822 | GAHQRPLQLGAGALAAQTARSR | n[145]GAHQRPLQLGAGALAAQTARSR | LRLSPGCGGWGALPRGARLLPRGAHQRPLQLGAGALAAQTARSRHPPQVRAARTLRFLTWRGWRSRNAGHEAQPRAPASA |
lnc-SPATA32-4:5 | OSCC | 10 | 0.158844 | noncoding | 104 | chr17 | 45247266 | 45247843 | - | 0.864 | lnc-SPATA32-4 | 1 | -3.385 | 2.441 | -3.122 | 2 | noncoding | -0.31863562 | VAAAGMEPTR | n[145]VAAAGMEPTR | LAGGGEGQARSGGRPGRNGDPAGGDGGGTRGDGYWASHESLRPLEAGSLAANSSEEAALLPGARWFAEACYEELVQVKRLLSGNRLRVAAAGMEPTRIFCKHLY |
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