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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SPRY1-8:1 | EOGC | 22 | 0.535671 | coding | 100 | chr4 | 124062461 | 124062990 | + | 0.0828 | lnc-SPRY1-8 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.318750088 | VVSSHAIIALVAGPSMGRYLMR | n[145]VVSSHAIIALVAGPSMGRYLMR | MPLANQSPLLPAMVNPTVFFYIAIPGEPLGPNSFGLFAEIIPKTAEICSALSTGEKGFVIRVPAFEELFQGLCVRVVSSHAIIALVAGPSMGRYLMRTST |
lnc-SPATA32-1:2 | OV | 19 | 0.218342 | noncoding | 182 | chr17 | 45231048 | 45241770 | - | 0.0687 | lnc-SPATA32-1 | 1 | -3.64 | -1.186 | -3.822 | 1 | noncoding | -0.286121436 | RATPQTFTSSSPLSPQPLR | n[145]RATPQTFTSSSPLSPQPLR | LRWQEPACSSPVLSDAIPNPPTPLQAPAATHTKRQGPRQRPLPRGAPTLPTQTPQIRRATPQTFTSSSPLSPQPLRCQAELLQGDPYQRLQGQLSTLFPLPSPYPWTAAQPAQAICFISRRQRPSLGSQGRLSAPNSPPPASAASLLHRIPAAAEPHPAQRWERVGPWPTAALEAGGVGTAE |
lnc-SPATA32-2:1 | CCRC | 8 | 0.450895 | noncoding | 379 | chr17 | 45214009 | 45222849 | - | 0.9956 | lnc-SPATA32-2 | 1 | 5.157 | 11.256 | 0.583 | 3 | noncoding | -0.239874832 | GALGSAAR | n[230]GALGSAAR | LKKRPLSLPPPGGGSCRTGDLQAAPESPGAGTRAQPLPRPCRPPPAPDPPPGRTHQGAVEPLLQLSGRGHRLLGRRGLLGGRRGGARGLLGAAGRVAHGGPHPAGQAPPASEIQLSGGRGRGSRPGRGRGGSGWRWRRGSRQRGALGSAARRGRSAASHRGGPVRGTGRRAAGLGEEVRLQAAGARGLGRGQEAAALAPPSAIFELLLSLPVRANRSSPPPPPGTQPQGGGLEGGGGRWPGDPRNHGGRGVGCRAASPAAEGAAGAASPAGAGGHRGEAEAAARSAAPPGPRTASSRSPRARDWPGLGEGDHGLGIGGAHLLRTEDLSDCEHGSETHGGAALGRQGCVPVSRPGLRRWEPPSRPPTFYFSPPLLSPETS |
lnc-SPATA32-2:1 | HCC | 8 | 0.450895 | noncoding | 379 | chr17 | 45214009 | 45222849 | - | 0.9994 | lnc-SPATA32-2 | 1 | 5.157 | 11.256 | 0.583 | 38 | noncoding | -0.239874832 | GALGSAAR | n[230]GALGSAAR | LKKRPLSLPPPGGGSCRTGDLQAAPESPGAGTRAQPLPRPCRPPPAPDPPPGRTHQGAVEPLLQLSGRGHRLLGRRGLLGGRRGGARGLLGAAGRVAHGGPHPAGQAPPASEIQLSGGRGRGSRPGRGRGGSGWRWRRGSRQRGALGSAARRGRSAASHRGGPVRGTGRRAAGLGEEVRLQAAGARGLGRGQEAAALAPPSAIFELLLSLPVRANRSSPPPPPGTQPQGGGLEGGGGRWPGDPRNHGGRGVGCRAASPAAEGAAGAASPAGAGGHRGEAEAAARSAAPPGPRTASSRSPRARDWPGLGEGDHGLGIGGAHLLRTEDLSDCEHGSETHGGAALGRQGCVPVSRPGLRRWEPPSRPPTFYFSPPLLSPETS |
lnc-SPATA32-2:1 | HCC | 9 | 0.450895 | noncoding | 379 | chr17 | 45214009 | 45222849 | - | 0.146 | lnc-SPATA32-2 | 1 | 5.157 | 11.256 | 0.583 | 1 | noncoding | -0.239874832 | GALGSAARR | n[230]GALGSAARR | LKKRPLSLPPPGGGSCRTGDLQAAPESPGAGTRAQPLPRPCRPPPAPDPPPGRTHQGAVEPLLQLSGRGHRLLGRRGLLGGRRGGARGLLGAAGRVAHGGPHPAGQAPPASEIQLSGGRGRGSRPGRGRGGSGWRWRRGSRQRGALGSAARRGRSAASHRGGPVRGTGRRAAGLGEEVRLQAAGARGLGRGQEAAALAPPSAIFELLLSLPVRANRSSPPPPPGTQPQGGGLEGGGGRWPGDPRNHGGRGVGCRAASPAAEGAAGAASPAGAGGHRGEAEAAARSAAPPGPRTASSRSPRARDWPGLGEGDHGLGIGGAHLLRTEDLSDCEHGSETHGGAALGRQGCVPVSRPGLRRWEPPSRPPTFYFSPPLLSPETS |
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