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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SPPL2A-1:9 | OV | 18 | 0.0170358 | noncoding | 46 | chr15 | 50886369 | 50888684 | - | 0.9608 | lnc-SPPL2A-1 | 0.685 | 0 | 0 | 0 | 4 | noncoding | -0.335906758 | GPSFQQIVLGQLNIHMQK | n[145]GPSFQQIVLGQLNIHM[147]QK | MEKGPSFQQIVLGQLNIHMQKSEPRLLLHIIYKMELKMDLRPTCEK |
lnc-SPR-3:1 | HCC | 8 | 0.00800104 | noncoding | 73 | chr2 | 72288784 | 72289110 | + | 0.5464 | lnc-SPR-3 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.444186609 | HGYIGEFK | n[230]HGYIGEFK | LCSKVIVQFLTVLLKHGYIGEFKIIENHRAGKIIVNLTSRLNKCGVISPRFAVQLKDLEKWQNNNPASLVSLY |
lnc-SPRED2-1:2 | CCRC | 7 | 0.0387709 | noncoding | 51 | chr2 | 65450352 | 65455697 | - | 0.9961 | lnc-SPRED2-1 | 1 | -4.467 | -5.833 | -5.187 | 7 | noncoding | -0.383605726 | SMNGEVK | n[230]SMNGEVK | MIAPHPAPNTSTQLNFLLNKSMNGEVKRNQKLGLQKSLMEEFQDSRSGQPC |
lnc-SPRED2-2:1 | OV | 23 | 0.231885 | noncoding | 87 | chr2 | 65589565 | 65640177 | - | 0.9847 | lnc-SPRED2-2 | 0.111 | 0 | 0 | 0 | 6 | noncoding | -0.340078225 | LTAASLPDSPASACPVPAIAGAR | n[145]LTAASLPDSPASACPVPAIAGAR | LLCGINLKMSNFSSDATRLKAVHDPLYKEVYLGSPSPSPSPSPHGLPLMPSRSWTVLLPSRLTAASLPDSPASACPVPAIAGARRHA |
lnc-SPRED2-9:1 | BRCA-Basal-like | 13 | 0.107475 | noncoding | 79 | chr2 | 65500992 | 65502138 | - | 0.9993 | lnc-SPRED2-9 | 1 | 0 | 0 | 0 | 7 | coding | 0.693056129 | QSGPASSWGFPPR | n[145]QSGPASSWGFPPR | LEVRRGASDEDLKKAYHKLALKFHPDKNHAPGTTGAFKAIGTAYAVLSNPEKRKHMTTWAITGVRQSGPASSWGFPPRL |
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