top of page
lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SPOCK2-3:1 | PRAD | 8 | 0.0792765 | noncoding | 51 | chr10 | 72053293 | 72054037 | - | 0.8181 | lnc-SPOCK2-3 | 0.096 | -4.238 | -3.847 | -4.351 | 1 | noncoding | -0.289645908 | KTPGPGLR | LSWRASLGPGNAQLFNMKLPQDPQDHPGGAPIRRRKTPGPGLRGPVHLLSC | |
lnc-SPON1-4:1 | BRCA-Luminal B | 14 | 0.120756 | noncoding | 86 | chr11 | 14440786 | 14441677 | + | 0.8072 | lnc-SPON1-4 | 1 | 0 | 0 | 0 | 1 | coding | 0.704190976 | FAYLGHLAHEVGWK | n[145]FAYLGHLAHEVGWK | MVVPAALKVVCLKPTKKFAYLGHLAHEVGWKYQAVTATLEEKRKEKAKTHYWKKKQLTRLRKLAEKNVEKKIDKYTEVLQTHGLLV |
lnc-SPON1-4:1 | OV | 14 | 0.120756 | noncoding | 86 | chr11 | 14440786 | 14441677 | + | 0.4978 | lnc-SPON1-4 | 1 | 0 | 0 | 0 | 1 | coding | 0.704190976 | FAYLGHLAHEVGWK | n[145]FAYLGHLAHEVGWK | MVVPAALKVVCLKPTKKFAYLGHLAHEVGWKYQAVTATLEEKRKEKAKTHYWKKKQLTRLRKLAEKNVEKKIDKYTEVLQTHGLLV |
lnc-SPOPL-10:1 | OV | 10 | 0.0949451 | noncoding | 57 | chr2 | 138278573 | 138279210 | + | 0.9765 | lnc-SPOPL-10 | 1 | 0 | 0 | 0 | 8 | noncoding | -0.338276251 | HADWATKPSK | n[145]HADWATKPSK | LLSTGLAQSGSSLLSTGLPAPPSPIKHADWATKPSKVTLYIGFVFAVVAGNAQFLRL |
lnc-SPOPL-12:1 | OSCC | 12 | 0.309883 | noncoding | 76 | chr2 | 138897150 | 138898098 | + | 0.9323 | lnc-SPOPL-12 | 1 | 0 | 0 | 0 | 4 | noncoding | -0.299304536 | LSVSMWYSDENK | n[145]LSVSMWYSDENK | MGNQILILVPELASGDHHHHLEQALVTIVGAGKGGCGTILGNKKWGQKRVQIRNLEGKLSVSMWYSDENKKTLTIK |
Page 1 of 1
bottom of page