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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SPTLC3-7:1 | OV | 7 | 0.0366018 | noncoding | 60 | chr20 | 12883810 | 12886553 | + | 0.882 | lnc-SPTLC3-7 | 0.23 | 0 | 0 | 0 | 2 | noncoding | -0.437667689 | TSHVPPK | n[145]TSHVPPK | MAPVSEPDGQSKMTCPASRIIISKITGILIGKETKHLSCPLRKTSHVPPKYIHLLCTHKN |
lnc-SPTSSA-2:1 | BRCA-HER2-enriched | 7 | 0.944589 | coding | 41 | chr14 | 34416686 | 34417602 | - | 0.9967 | lnc-SPTSSA-2 | 1 | 0 | 0 | 0 | 4 | noncoding | -0.366812862 | EGHFLHK | n[145]EGHFLHK | MEATFENMKDDPLANYANLLNIRIRRKSKEGHFLHKNTIGD |
lnc-SPTSSA-2:1 | BRCA-Luminal B | 7 | 0.944589 | coding | 41 | chr14 | 34416686 | 34417602 | - | 0.9967 | lnc-SPTSSA-2 | 1 | 0 | 0 | 0 | 4 | noncoding | -0.366812862 | EGHFLHK | n[145]EGHFLHK | MEATFENMKDDPLANYANLLNIRIRRKSKEGHFLHKNTIGD |
lnc-SPTSSA-2:1 | CCRC | 7 | 0.944589 | coding | 41 | chr14 | 34416686 | 34417602 | - | 0.9966 | lnc-SPTSSA-2 | 1 | 0 | 0 | 0 | 3 | noncoding | -0.366812862 | EGHFLHK | n[230]EGHFLHK | MEATFENMKDDPLANYANLLNIRIRRKSKEGHFLHKNTIGD |
lnc-SPTSSB-2:1 | OV | 12 | 0.0667492 | noncoding | 50 | chr3 | 161328923 | 161330238 | - | 0.9924 | lnc-SPTSSB-2 | 1 | 0 | 0 | 0 | 2 | noncoding | -0.330721217 | TPQETYADTGGK | n[145]TPQETYADTGGK | LLEPGCSVLLSHKVHAVIGVLMDDTDPLFTVMKVEKTPQETYADTGGKVG |
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