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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SSTR4-2:2 | OV | 8 | 0.0649606 | noncoding | 61 | chr20 | 23180131 | 23190298 | + | 0.923 | lnc-SSTR4-2 | 0.924 | -4.463 | -5.101 | -4.163 | 5 | noncoding | -0.340593803 | KISQVTVR | n[145]KISQVTVR | LGNNPKERDRAFIKQHVSISAVAVPRAHFLDIASCLDQPFRKISQVTVRVKAGGHWRLQGL |
lnc-SSU72P2-2:1 | CCRC | 26 | 0.992403 | coding | 175 | chr11 | 4210353 | 4212091 | - | 0.5366 | lnc-SSU72P2-2 | 1 | 0 | 0 | 0 | 4 | coding | 0.654124378 | EAILKDEIYCPTETAVLLASYAVQAK | EAILKDEIYCPTETAVLLASYAVQAK | MLSWKFAIQPKTTGKQLFDHVVKIVGLREVWFLGLQYVDSRGYSTWLQLNKKVTQQDVKKEKDPLQFKFRAKFFPEDVSEELIQEITQRLFFLQVKEAILKDEIYCPTETAVLLASYAVQAKYGDYNKEIHNPGYLANDRLLPQRIGTTQTNKNSGKKEYRTGMKNIEEYKGRVL |
lnc-SRP9-1:1 | BRCA-Luminal A | 7 | 0.345825 | noncoding | 37 | chr1 | 225700603 | 225752243 | + | 0.9957 | lnc-SRP9-1 | 1 | -2.114 | 1.197 | -1.756 | 33 | noncoding | -0.369318675 | DRAYLSR | n[145]DRAYLSR | LMWCSISAFSMKPRLRPSPFRKQRTRDRAYLSRYSSW |
lnc-SRP9-1:1 | BRCA-Luminal B | 7 | 0.345825 | noncoding | 37 | chr1 | 225700603 | 225752243 | + | 0.9957 | lnc-SRP9-1 | 1 | -2.114 | 1.197 | -1.756 | 33 | noncoding | -0.369318675 | DRAYLSR | n[145]DRAYLSR | LMWCSISAFSMKPRLRPSPFRKQRTRDRAYLSRYSSW |
lnc-SRP9-1:1 | OV | 12 | 0.345825 | noncoding | 49 | chr1 | 225700603 | 225752243 | + | 0.7854 | lnc-SRP9-1 | 0.402 | -4.172 | -4.923 | -5.096 | 3 | noncoding | -0.369318675 | SDEQGMEAYLDR | n[145]SDEQGM[147]EAYLDR | MVPSPTLGTRSDEQGMEAYLDRGLHLRPAPDTKPNVSLVFLTASSHHPE |
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