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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SSTR2-3:1 | OSCC | 21 | 0.0176573 | noncoding | 38 | chr17 | 72839038 | 72839718 | + | 0.8157 | lnc-SSTR2-3 | 0.014 | -6.203 | -4.302 | -6.201 | 4 | noncoding | -0.354226599 | ISGLHSEDTFGLCGWPNDGSK | n[145]ISGLHSEDTFGLCGWPNDGSK | MLAAEDISELKLRISGLHSEDTFGLCGWPNDGSKYIQI |
lnc-SSTR3-2:1 | PRAD | 16 | 0.296658 | noncoding | 183 | chr22 | 37225263 | 37225995 | - | 0.74 | lnc-SSTR3-2 | 1 | -3.643 | -2.561 | -1.641 | 1 | noncoding | -0.35501728 | FAGAASQAPHAPAFLR | LQSFVDGLFCTGGLLRPGTCKFAGAASQAPHAPAFLRARGEPQDPLSHPRVPAVSANCRMWKHLPVHSSPTPRLTPLWKLQARWLLPQLVYLQGWGSYSLLRPAALISMVLLAREFLYPAKMSVSEVCSSGLSSPLLEQHKTNLIFYASGDICSANGKSGFNQPLPFLKTFCCTHRILSCTYL | |
lnc-SSTR3-2:1 | PRAD | 18 | 0.296658 | noncoding | 183 | chr22 | 37225263 | 37225995 | - | 0.674 | lnc-SSTR3-2 | 1 | -3.643 | -2.561 | -1.641 | 1 | noncoding | -0.35501728 | SGFNQPLPFLKTFCCTHR | SGFNQPLPFLKTFCCTHR | LQSFVDGLFCTGGLLRPGTCKFAGAASQAPHAPAFLRARGEPQDPLSHPRVPAVSANCRMWKHLPVHSSPTPRLTPLWKLQARWLLPQLVYLQGWGSYSLLRPAALISMVLLAREFLYPAKMSVSEVCSSGLSSPLLEQHKTNLIFYASGDICSANGKSGFNQPLPFLKTFCCTHRILSCTYL |
lnc-SSTR4-1:3 | OV | 18 | 0.0311563 | noncoding | 57 | chr20 | 23037719 | 23039236 | + | 0.744 | lnc-SSTR4-1 | 0.14 | 0 | 0 | 0 | 1 | noncoding | -0.330828623 | EWVAMSVLHTGDMTVEWK | n[145]EWVAM[147]SVLHTGDMTVEWK | MIILVVWGRWCGEGERQPKVNTLCPSEWSASQTTLREWVAMSVLHTGDMTVEWKFQN |
lnc-SSTR4-1:3 | OV | 15 | 0.0311563 | noncoding | 57 | chr20 | 23037719 | 23039236 | + | 0.3028 | lnc-SSTR4-1 | 0.14 | 0 | 0 | 0 | 1 | noncoding | -0.330828623 | IILVVWGRWCGEGER | n[145]IILVVWGRWCGEGER | MIILVVWGRWCGEGERQPKVNTLCPSEWSASQTTLREWVAMSVLHTGDMTVEWKFQN |
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