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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-ST3GAL6-5:1 | BRCA-Luminal A | 7 | 0.411705 | noncoding | 92 | chr3 | 98657739 | 98658166 | + | 0.4972 | lnc-ST3GAL6-5 | 1 | 0 | 0 | 0 | 3 | noncoding | -0.431128128 | MATASPK | n[145]MATASPK | MATASPKSDTTNNHSGRLQLQVTVSSAKLKRRKNWFGTAIYTEVVVDEEIRKTAKSSSSSNLKWDEQLTVNVTPQTTLEFRVWSHHTLKADA |
lnc-ST3GAL6-5:1 | BRCA-Luminal B | 7 | 0.411705 | noncoding | 92 | chr3 | 98657739 | 98658166 | + | 0.4972 | lnc-ST3GAL6-5 | 1 | 0 | 0 | 0 | 3 | noncoding | -0.431128128 | MATASPK | n[145]MATASPK | MATASPKSDTTNNHSGRLQLQVTVSSAKLKRRKNWFGTAIYTEVVVDEEIRKTAKSSSSSNLKWDEQLTVNVTPQTTLEFRVWSHHTLKADA |
lnc-SSBP1-2:1 | OV | 11 | 0.0239655 | noncoding | 54 | chr7 | 141787814 | 141788640 | + | 0.8507 | lnc-SSBP1-2 | 0.79 | -5.698 | -4.79 | -4.309 | 2 | noncoding | -0.419280831 | SVIFIDCCPVK | n[145]SVIFIDCCPVK | LFFASVFQDHFLFLSSCWLDPLKTLNRKQQHPASHFKSVIFIDCCPVKETDCYL |
lnc-SSBP4-2:1 | OV | 9 | 0.23074 | noncoding | 37 | chr19 | 18441109 | 18444432 | + | 0.7713 | lnc-SSBP4-2 | 0.908 | -4.605 | -5.695 | -4.328 | 3 | noncoding | -0.309540047 | LSWENSVAR | n[145]LSWENSVAR | MLSWENSVARLCWEQGTRCPTGLHDFPSRAPQIPGWP |
lnc-SSH3-4:1 | OV | 21 | 0.36765 | noncoding | 113 | chr11 | 67296627 | 67298056 | + | 0.942 | lnc-SSH3-4 | 0.03 | 0 | 0 | 0 | 32 | noncoding | -0.396279856 | AWPGLYLCLISFLVFFFFSER | n[145]AWPGLYLCLISFLVFFFFSER | LFLVEMGFHHVAQAGLELLCSSNLPVSASQSAGITGVSHRAWPGLYLCLISFLVFFFFSERESCSVAQAGVQWHDLGLLQAPPPGFTPFSWLSLPSSWDYRRLPPRPANFLYF |
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