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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-ST7L-4:1 | OV | 21 | 0.351341 | noncoding | 40 | chr1 | 112517798 | 112518441 | - | 0.9801 | lnc-ST7L-4 | 0.602 | -5.45 | -5.449 | -4.293 | 26 | noncoding | -0.38638735 | LVCSLSLGQIMCFPTYYSLIR | n[145]LVCSLSLGQIM[147]CFPTYYSLIR | LVCSLSLGQIMCFPTYYSLIRNCPLVSQAIQILPTLQGAA |
lnc-ST8SIA2-3:1 | OV | 12 | 0.516053 | coding | 55 | chr15 | 92602909 | 92620015 | + | 0.6954 | lnc-ST8SIA2-3 | 0.076 | -5.282 | -4.957 | -3.313 | 1 | noncoding | -0.362652755 | LENFFCDSPERK | n[145]LENFFCDSPERK | LENFFCDSPERKYCKLCRSHNHGDNSSTLLLGWNSSHSKKCLAMAVFQYNVIYRH |
lnc-ST8SIA2-3:1 | OV | 21 | 0.516053 | coding | 55 | chr15 | 92602909 | 92620015 | + | 0.513 | lnc-ST8SIA2-3 | 0.076 | -5.282 | -4.957 | -3.313 | 1 | noncoding | -0.362652755 | SHNHGDNSSTLLLGWNSSHSK | n[145]SHNHGDNSSTLLLGWNSSHSK | LENFFCDSPERKYCKLCRSHNHGDNSSTLLLGWNSSHSKKCLAMAVFQYNVIYRH |
lnc-ST8SIA2-7:1 | OSCC | 12 | 0.509837 | coding | 49 | chr15 | 92471653 | 92501117 | + | 0.8247 | lnc-ST8SIA2-7 | 0.035 | -3.469 | -3.584 | -3.99 | 2 | coding | 0.627470441 | SPDYCMLAVGGK | n[145]SPDYCM[147]LAVGGK | LIPGWARFCLVGFFATAVVLVASRSPDYCMLAVGGKACLPCSLPPLHVL |
lnc-ST8SIA4-3:5 | EOGC | 25 | 0.209372 | noncoding | 149 | chr5 | 100376018 | 100535243 | - | 0.8445 | lnc-ST8SIA4-3 | 1 | 0 | 0 | 0 | 14 | coding | 0.708136831 | CHLDLLGLSDPPHSASQIAGTTDVR | n[145]CHLDLLGLSDPPHSASQIAGTTDVR | LSAAGEGLQPALLAWRQHLLPQPLSLHGGDAADMLPSQGLTLLPRLEGSGAITARCHLDLLGLSDPPHSASQIAGTTDVRCLSRVNFNIFFPTSQSLALLPRLESSVAILAHCILYLLGSNSSPASPSRVAGITGSCHHAQIVFFFIFC |
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