top of page
lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-STON1-GTF2A1L-5:1 | OSCC | 13 | 0.0841075 | noncoding | 125 | chr2 | 48809339 | 49419013 | + | 0.9962 | lnc-STON1-GTF2A1L-5 | 0.998 | -4.42 | -4.401 | -4.155 | 4 | noncoding | -0.396628271 | VLSDTASGTTLMK | n[145]VLSDTASGTTLM[147]K | LHFPVSFLASCGFVTKSWPVGYKQKCFVAAFRKFRQKKALMCPFYSSFLHPAGCNVDMMAGAAVTFWNYEVTLRKEAVTSRMTREMEACFLKGSQKAAIFVWRVLSDTASGTTLMKVESSTYLKL |
lnc-STON2-2:1 | OV | 10 | 0.628996 | coding | 129 | chr14 | 81259564 | 81260239 | - | 0.3082 | lnc-STON2-2 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.40190321 | RTGFVAEERK | n[145]RTGFVAEERK | LYSIKRTGFVAEERKHYTVYPPQHQVFTWTQMCDIGGVEVVILGQDPYHRPYQAHEAALVSKGLCDLCLVWKTCMKSCLQTDGFDHPGHGDLSGWAKQGVLFTVFTVQSHQANSPERGWEHLPMQLCPG |
lnc-ST3GAL6-5:1 | BRCA-HER2-enriched | 11 | 0.411705 | noncoding | 92 | chr3 | 98657739 | 98658166 | + | 0.0884 | lnc-ST3GAL6-5 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.431128128 | TAKSSSSSNLK | n[145]TAKSSSSSNLK | MATASPKSDTTNNHSGRLQLQVTVSSAKLKRRKNWFGTAIYTEVVVDEEIRKTAKSSSSSNLKWDEQLTVNVTPQTTLEFRVWSHHTLKADA |
lnc-ST3GAL6-5:1 | HCC | 7 | 0.411705 | noncoding | 92 | chr3 | 98657739 | 98658166 | + | 0.9967 | lnc-ST3GAL6-5 | 1 | 0 | 0 | 0 | 12 | noncoding | -0.431128128 | MATASPK | n[230]MATASPK | MATASPKSDTTNNHSGRLQLQVTVSSAKLKRRKNWFGTAIYTEVVVDEEIRKTAKSSSSSNLKWDEQLTVNVTPQTTLEFRVWSHHTLKADA |
lnc-ST3GAL6-5:1 | HCC | 26 | 0.411705 | noncoding | 92 | chr3 | 98657739 | 98658166 | + | 0.1191 | lnc-ST3GAL6-5 | 1 | 0 | 0 | 0 | 2 | noncoding | -0.431128128 | SSSSSNLKWDEQLTVNVTPQTTLEFR | SSSSSNLKWDEQLTVNVTPQTTLEFR | MATASPKSDTTNNHSGRLQLQVTVSSAKLKRRKNWFGTAIYTEVVVDEEIRKTAKSSSSSNLKWDEQLTVNVTPQTTLEFRVWSHHTLKADA |
Page 1 of 1
bottom of page