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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-STMN2-1:1 | OSCC | 16 | 0.0333384 | noncoding | 33 | chr8 | 79297716 | 79314471 | + | 0.9462 | lnc-STMN2-1 | 0.26 | -5.262 | -6.162 | -5.118 | 13 | noncoding | -0.472452137 | SGIEIQASWVMRKTEK | n[145]SGIEIQASWVM[147]RKTEK | MVRLSFMCCLGLRRSGIEIQASWVMRKTEKHFS |
lnc-STMND1-4:6 | OV | 27 | 0.21342 | noncoding | 94 | chr6 | 16761596 | 16766750 | + | 0.7887 | lnc-STMND1-4 | 1 | -0.079 | -0.733 | 4.85 | 11 | coding | 0.639787901 | EQLAAAAAAQGSDFMGVGGTLWRAARR | n[145]EQLAAAAAAQGSDFM[147]GVGGTLWRAARR | MEQLAAAAAAQGSDFMGVGGTLWRAARRAAQSTASAPRGGRPAPLTLRCAPPGEAGTFPKEWLGMGCGGGETRTGGQGSFQVWEGGGELGDEVI |
lnc-STMND1-4:6 | OV | 27 | 0.21342 | noncoding | 94 | chr6 | 16761596 | 16766750 | + | 0.7887 | lnc-STMND1-4 | 1 | -0.079 | -0.733 | 4.85 | 11 | coding | 0.639787901 | EQLAAAAAAQGSDFMGVGGTLWRAARR | n[145]EQLAAAAAAQGSDFMGVGGTLWRAARR | MEQLAAAAAAQGSDFMGVGGTLWRAARRAAQSTASAPRGGRPAPLTLRCAPPGEAGTFPKEWLGMGCGGGETRTGGQGSFQVWEGGGELGDEVI |
lnc-STMND1-4:9 | OV | 8 | 0.145743 | noncoding | 37 | chr6 | 16761725 | 16779864 | + | 0.9175 | lnc-STMND1-4 | 1 | -5.836 | -3.959 | -3.703 | 1 | noncoding | -0.350238855 | LAFCFLKR | n[145]LAFCFLKR | LAFCFLKRNTFSKFKSKPEPPFFELKVVAADGLCLLS |
lnc-STMND1-4:9 | OV | 13 | 0.145743 | noncoding | 37 | chr6 | 16761725 | 16779864 | + | 0.6263 | lnc-STMND1-4 | 1 | -5.836 | -3.959 | -3.703 | 1 | noncoding | -0.350238855 | LAFCFLKRNTFSK | n[145]LAFCFLKRNTFSK | LAFCFLKRNTFSKFKSKPEPPFFELKVVAADGLCLLS |
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