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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SMIM15-AS1:21 | OV | 9 | 0.124985 | noncoding | 60 | chr5 | 61162101 | 61186461 | + | 0.9867 | SMIM15-AS1 | 0.492 | 0 | -4.96 | -5.228 | 69 | noncoding | -0.34649336 | VQDVYPSTK | n[145]VQDVYPSTK | LVCVGSYTGRGALEEKWCLRKITVNWQQARVQDVYPSTKFSQPALAMLLFYKLLYILYNI |
SNAI3-AS1:1 | OV | 14 | 0.237431 | noncoding | 109 | chr16 | 88663297 | 88687186 | + | 0.6704 | SNAI3-AS1 | 0.155 | 0 | 0 | 0 | 5 | noncoding | -0.292300858 | LASASAIRGLGAAR | n[145]LASASAIRGLGAAR | LRRRRVPRRLASASAIRGLGAARSGVADVDSWTLLGASALCRLVDAFGENLCSPQLQGQHAFLASSDQGGCSWVLHQNSSSGLSSSGRLTSFLPRPRSVFSQCCHLSSV |
SNAI3-AS1:13 | BRCA-HER2-enriched | 10 | 0.0102646 | noncoding | 59 | chr16 | 88671805 | 88673808 | + | 0.9964 | SNAI3-AS1 | 0.596 | 0 | 0 | 0 | 12 | noncoding | -0.307381005 | VLTVLPSFLR | n[145]VLTVLPSFLR | LKWPAHLIPAKTQVRVLTVLPSFLRVSVGCAESGPRCVRGCVHCHRSLYTSRRGPRAEL |
SNAI3-AS1:13 | BRCA-Luminal B | 10 | 0.0102646 | noncoding | 59 | chr16 | 88671805 | 88673808 | + | 0.9964 | SNAI3-AS1 | 0.596 | 0 | 0 | 0 | 12 | noncoding | -0.307381005 | VLTVLPSFLR | n[145]VLTVLPSFLR | LKWPAHLIPAKTQVRVLTVLPSFLRVSVGCAESGPRCVRGCVHCHRSLYTSRRGPRAEL |
SNAI3-AS1:13 | BRCA-Basal-like | 10 | 0.0102646 | noncoding | 59 | chr16 | 88671805 | 88673808 | + | 0.9964 | SNAI3-AS1 | 0.596 | 0 | 0 | 0 | 12 | noncoding | -0.307381005 | VLTVLPSFLR | n[145]VLTVLPSFLR | LKWPAHLIPAKTQVRVLTVLPSFLRVSVGCAESGPRCVRGCVHCHRSLYTSRRGPRAEL |
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