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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-STX6-6:7 | OV | 27 | 0.423255 | noncoding | 76 | chr1 | 181093887 | 181105215 | - | 0.9706 | lnc-STX6-6 | 0.994 | -5.251 | -4.495 | -3.052 | 3 | noncoding | -0.345439546 | DVPDAIGDSALLSLSQGLMASLGPWPK | n[145]DVPDAIGDSALLSLSQGLM[147]ASLGPWPK | LAQQVNGKGGPGRGRLGKHGFGGATSAAEDRVQYREGRGRDVPDAIGDSALLSLSQGLMASLGPWPKGRPELRDQG |
lnc-STX7-1:1 | OV | 10 | 0.12144 | noncoding | 75 | chr6 | 132518829 | 132519295 | - | 0.9689 | lnc-STX7-1 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.364330292 | IIDVHIEHIK | n[145]IIDVHIEHIK | MPHNYHHGKTGRVYNVTQHTVGTVVNKQVNGMILAKIIDVHIEHIKYSKCRDSFLKHVKENDQKRISRRKSPEFN |
lnc-STX7-1:1 | OV | 15 | 0.12144 | noncoding | 75 | chr6 | 132518829 | 132519295 | - | 0.6701 | lnc-STX7-1 | 1 | 0 | 0 | 0 | 2 | noncoding | -0.364330292 | VYNVTQHTVGTVVNK | n[145]VYNVTQHTVGTVVNK | MPHNYHHGKTGRVYNVTQHTVGTVVNKQVNGMILAKIIDVHIEHIKYSKCRDSFLKHVKENDQKRISRRKSPEFN |
lnc-STX8-1:2 | BRCA-HER2-enriched | 8 | 0.252436 | noncoding | 39 | chr17 | 9634319 | 9646032 | - | 0.9992 | lnc-STX8-1 | 0.995 | -4.778 | -4.387 | -6.395 | 4 | noncoding | -0.249533843 | LFNFDHLK | n[145]LFNFDHLK | LFNFDHLKAMVPNSTESNTYFISQIFPNTCVLSWSEIHR |
lnc-STX8-1:2 | BRCA-Luminal B | 8 | 0.252436 | noncoding | 39 | chr17 | 9634319 | 9646032 | - | 0.9992 | lnc-STX8-1 | 0.995 | -4.778 | -4.387 | -6.395 | 4 | noncoding | -0.249533843 | LFNFDHLK | n[145]LFNFDHLK | LFNFDHLKAMVPNSTESNTYFISQIFPNTCVLSWSEIHR |
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