top of page
lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SV2B-1:3 | LUAD | 7 | 0.0260761 | noncoding | 45 | chr15 | 91463338 | 91494848 | + | 0.9973 | lnc-SV2B-1 | 0.097 | 0 | 0 | 0 | 20 | noncoding | -0.357894847 | SYNDSAK | n[230]SYNDSAK | MSYNDSAKDEKKELGNTVVRSYITCVATLLFEGGLRLFKIVYYKT |
lnc-STYXL1-1:1 | OV | 7 | 0.0239376 | noncoding | 43 | chr7 | 76006794 | 76279258 | - | 0.6975 | lnc-STYXL1-1 | 0.04 | -6.656 | -5.05 | -4.529 | 3 | noncoding | -0.309213259 | ALGVSYR | n[145]ALGVSYR | MALGVSYRGQGAVQAFPCRAGAELNMEVDPGGQPHWWKGTDGS |
lnc-STYXL1-1:1 | OV | 8 | 0.0239376 | noncoding | 74 | chr7 | 76006794 | 76279258 | - | 0.9829 | lnc-STYXL1-1 | 0.982 | 0 | 0 | 0 | 2 | noncoding | -0.309213259 | LTLVSFFK | n[145]LTLVSFFK | LTLVSFFKKSLLATLVRGGSAAGQSTELRNQPGCEPWLQLWSLNLSQLLLLFLFFLSLSLLSFSLSLFFFFVVV |
lnc-STYXL1-3:1 | OV | 19 | 0.296384 | noncoding | 264 | chr7 | 76071468 | 76074963 | - | 0.6062 | lnc-STYXL1-3 | 0.286 | 0 | 0 | 0 | 1 | noncoding | -0.215184316 | WPSPAVFLPASQRPRQAHR | n[145]WPSPAVFLPASQRPRQAHR | LQAQVGKPPPRPGGCLPAYSPGPALSRGCASMPSPSLQTAASDSARAQIPAAFVRPKPPPAQLSRPTCGLAVASPGPDLASRWPSPAVFLPASQRPRQAHRMPLTGLWRSSSSLTVASPGPAPARPDGVSRPRVSQVGPSRAQLLPPGRWPVRAQSVLKSASPGPAPACRRPLDLRHGLCLLTVDPHQAQLLPQHGRLRPGSCSACGQPPRARLSPLAILSRPRSVSSQPLQAQLSLPAAPAGPAPASQQPRSAQLLPSSWQPL |
lnc-STYXL1-3:1 | PRAD | 29 | 0.296384 | noncoding | 189 | chr7 | 76071468 | 76074963 | - | 0.3845 | lnc-STYXL1-3 | 0.764 | 0 | 0 | 0 | 1 | noncoding | -0.215184316 | AASSGPNPCLTTTTFGPAPGSLCRPQAPR | AASSGPNPCLTTTTFGPAPGSLCRPQAPR | LPAADGLCGPTQSIPKLASPGPAPACCRPLGARPLPHTSPPGTSSCLILAASGQAPAFWWSIHAWLLTAGILSRPRTVSSGPLQARLSIRAASSGPNPCLTTTTFGPAPGSLCRPQAPRSEASQAPPSAPWWPGEAQLLPDSGLSGPRSCLVSASPGHVATCLAAAQTGPAPASHRPFWAHLVPHRGLP |
Page 1 of 1
bottom of page