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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SUMF2-8:1 | CCRC | 24 | 0.0848477 | noncoding | 42 | chr7 | 56163144 | 56163533 | + | 0.9999 | lnc-SUMF2-8 | 0.473 | 0 | 0 | 0 | 52 | coding | 0.673918091 | MNHTVQTFFSPVNSGQPLNYEMLK | n[43]M[147]NHTVQTFFSPVNSGQPLNYEMLK | MNHTVQTFFSPVNSGQPLNYEMLKEEHEVAVPGVPHNPAPPT |
lnc-SUMF2-9:1 | LUAD | 18 | 0.119085 | noncoding | 93 | chr7 | 56175633 | 56176412 | + | 0.9957 | lnc-SUMF2-9 | 0.986 | 0 | 0 | 0 | 2 | noncoding | -0.316255277 | MKKHGTSAALVDALNSQK | n[43]M[147]KKHGTSAALVDALNSQK | MKKHGTSAALVDALNSQKYFSRSRELYRELDSNSVLLKLRLKPSVNYYQVADFKDALVRVYGVTPKIQCLPRSQDGEVQTIGQTELCLTEQGQ |
lnc-SUMF2-9:1 | LUAD | 7 | 0.119085 | noncoding | 93 | chr7 | 56175633 | 56176412 | + | 0.1574 | lnc-SUMF2-9 | 0.986 | 0 | 0 | 0 | 1 | noncoding | -0.316255277 | VYGVTPK | n[230]VYGVTPK | MKKHGTSAALVDALNSQKYFSRSRELYRELDSNSVLLKLRLKPSVNYYQVADFKDALVRVYGVTPKIQCLPRSQDGEVQTIGQTELCLTEQGQ |
lnc-SUMO1-2:1 | OV | 7 | 0.0577161 | noncoding | 66 | chr2 | 202113625 | 202117058 | - | 0.4586 | lnc-SUMO1-2 | 1 | -3.88 | -4.233 | -2.65 | 1 | noncoding | -0.392394325 | AVFSLGK | n[145]AVFSLGK | LDYQLAVSTSAGWLERREKAVFSLGKYQKDFIILIKASAWHIRPLPSHSTGTSLSKCSSKSKLVMQ |
lnc-SUMO1-5:1 | BRCA-Luminal B | 15 | 0.014098 | noncoding | 46 | chr2 | 202329638 | 202337804 | - | 0.9981 | lnc-SUMO1-5 | 0.113 | 0 | 0 | 0 | 1 | noncoding | -0.383889159 | NSWLVESMDTKPIHR | n[145]NSWLVESM[147]DTKPIHR | LPGQYSETPFSTKKKKTKQKNSWLVESMDTKPIHRYRELTINMSSG |
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