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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-SYNE2-3:5 | OV | 11 | 0.159764 | noncoding | 42 | chr14 | 63642060 | 63665857 | + | 0.9971 | lnc-SYNE2-3 | 0.016 | 0 | -5.008 | 0 | 1 | noncoding | -0.277262128 | LSNIARPSLKK | n[145]LSNIARPSLKK | LSNIARPSLKKKKLYVILLASSHAQSLYQGSIRKIKSIGDIY |
lnc-SYNE2-3:7 | PRAD | 14 | 0.159764 | noncoding | 68 | chr14 | 63642060 | 63665857 | + | 0.9961 | lnc-SYNE2-3 | 0.311 | 0 | 0 | 0 | 10 | noncoding | -0.277262128 | QFFCLSLLSGWDYR | QFFCLSLLSGWDYR | LQPPPPGFKQFFCLSLLSGWDYRQVPPGTANFCIFSRDAVLPCWPGWSRSLDLVICLPRPPKVLGLQV |
lnc-SYNE2-4:1 | CCRC | 7 | 0.194947 | noncoding | 73 | chr14 | 63601508 | 63601814 | + | 0.4246 | lnc-SYNE2-4 | 1 | -4.483 | -5.19 | -1.541 | 2 | noncoding | -0.440431816 | MAGQAFK | n[230]M[147]AGQAFK | MAGQAFKFLPLFDRVLVERSAVETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVRVKVGDKVLLP |
lnc-SYNE2-4:1 | EOGC | 21 | 0.194947 | noncoding | 73 | chr14 | 63601508 | 63601814 | + | 0.1869 | lnc-SYNE2-4 | 1 | -4.483 | -5.19 | -1.541 | 1 | noncoding | -0.440431816 | VLVERSAVETVTKGGIMLPEK | n[145]VLVERSAVETVTKGGIMLPEK | MAGQAFKFLPLFDRVLVERSAVETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVRVKVGDKVLLP |
lnc-SYNE2-4:1 | LUAD | 7 | 0.194947 | noncoding | 73 | chr14 | 63601508 | 63601814 | + | 0.9394 | lnc-SYNE2-4 | 1 | -4.483 | -5.19 | -1.541 | 1 | noncoding | -0.440431816 | MAGQAFK | n[272]M[147]AGQAFK | MAGQAFKFLPLFDRVLVERSAVETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVRVKVGDKVLLP |
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