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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TAF4-4:1 | BRCA-Basal-like | 8 | 0.689408 | coding | 92 | chr20 | 61717505 | 61719748 | - | 0.9998 | lnc-TAF4-4 | 0.393 | 0 | 0 | 0 | 7 | noncoding | -0.310188351 | AGLGFPRR | n[145]AGLGFPRR | MPRRAGLGFPRRQSGVWKAGPLGQHIPFTLPWGRQQDPAAQSSGWVLTSPTPTVWVLPCLLWDQVSVATVKGRIPSQGTLPTEASIGRVLRM |
lnc-TAF4-4:1 | BRCA-Luminal B | 8 | 0.689408 | coding | 92 | chr20 | 61717505 | 61719748 | - | 0.9998 | lnc-TAF4-4 | 0.393 | 0 | 0 | 0 | 7 | noncoding | -0.310188351 | AGLGFPRR | n[145]AGLGFPRR | MPRRAGLGFPRRQSGVWKAGPLGQHIPFTLPWGRQQDPAAQSSGWVLTSPTPTVWVLPCLLWDQVSVATVKGRIPSQGTLPTEASIGRVLRM |
lnc-TAF4-4:1 | BRCA-HER2-enriched | 8 | 0.689408 | coding | 92 | chr20 | 61717505 | 61719748 | - | 0.9998 | lnc-TAF4-4 | 0.393 | 0 | 0 | 0 | 7 | noncoding | -0.310188351 | AGLGFPRR | n[145]AGLGFPRR | MPRRAGLGFPRRQSGVWKAGPLGQHIPFTLPWGRQQDPAAQSSGWVLTSPTPTVWVLPCLLWDQVSVATVKGRIPSQGTLPTEASIGRVLRM |
lnc-TAF4-4:1 | OV | 7 | 0.689408 | coding | 92 | chr20 | 61717505 | 61719748 | - | 0.5024 | lnc-TAF4-4 | 0.393 | 0 | 0 | 0 | 1 | noncoding | -0.310188351 | AGLGFPR | n[145]AGLGFPR | MPRRAGLGFPRRQSGVWKAGPLGQHIPFTLPWGRQQDPAAQSSGWVLTSPTPTVWVLPCLLWDQVSVATVKGRIPSQGTLPTEASIGRVLRM |
lnc-TAF4-4:1 | OV | 8 | 0.689408 | coding | 92 | chr20 | 61717505 | 61719748 | - | 0.9385 | lnc-TAF4-4 | 0.393 | 0 | 0 | 0 | 5 | noncoding | -0.310188351 | AGLGFPRR | n[145]AGLGFPRR | MPRRAGLGFPRRQSGVWKAGPLGQHIPFTLPWGRQQDPAAQSSGWVLTSPTPTVWVLPCLLWDQVSVATVKGRIPSQGTLPTEASIGRVLRM |
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