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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SOCS2-AS1:11 | OV | 12 | 0.448597 | noncoding | 238 | chr12 | 93559685 | 93571768 | - | 0.5155 | SOCS2-AS1 | 1 | 0 | 0.188 | 0 | 1 | noncoding | -0.256240159 | IINLNGSLGEIK | n[145]IINLNGSLGEIK | MPGDATSPALGGGGRSSVRRGHTKASRIIASTPSPTARRRPLRAGTPPLSDCCRVSLRLRPWRWEGEREGGRKERGREAGRWGGAGDQVIRRIINLNGSLGEIKKRNSRHFQTPRRGWRKQAATLGRGAEPRFGLSLPRRSELRKPRPSAAPRRTRPRLAALPGNSPRGGAFGLPPLPVPAAGARAAGTGYPEAVHPGPRRALSAGHAVRVAAGERAHASGEAQGPPAAAAATRLGKS |
SOCS2-AS1:11 | OV | 8 | 0.448597 | noncoding | 93 | chr12 | 93559685 | 93571768 | - | 0.3937 | SOCS2-AS1 | 1 | -1.645 | -1.279 | -3.652 | 1 | noncoding | -0.256240159 | KPDSPALR | n[145]KPDSPALR | LALGLPRGWVPLNIPAAPPRCDPPGRTFAGGGRAGATVGPRKPDSPALRHIDGVGTPCSSRCPRPGTGGGPLDQVLEGSERESSASLSGAGRP |
SOCS2-AS1:11 | OV | 7 | 0.448597 | noncoding | 93 | chr12 | 93559685 | 93571768 | - | 0.6849 | SOCS2-AS1 | 1 | -1.645 | -1.279 | -3.652 | 1 | noncoding | -0.256240159 | TFAGGGR | n[145]TFAGGGR | LALGLPRGWVPLNIPAAPPRCDPPGRTFAGGGRAGATVGPRKPDSPALRHIDGVGTPCSSRCPRPGTGGGPLDQVLEGSERESSASLSGAGRP |
SOCS2-AS1:12 | OSCC | 10 | 0.108821 | noncoding | 54 | chr12 | 93532415 | 93571768 | - | 0.8948 | SOCS2-AS1 | 1 | -4.159 | -5.64 | -5.003 | 38 | noncoding | -0.340441019 | LVNISQGLCK | n[145]LVNISQGLCK | LVNISQGLCKYCEKCHFVTASAKHQAHPSRDPLNTVLLRGVERCQIAHLLEKPK |
SOX2-OT:125 | OV | 14 | 0.0382659 | noncoding | 49 | chr3 | 181723192 | 181740840 | + | 0.999 | SOX2-OT | 1 | 0 | 0 | 0 | 4 | noncoding | -0.363603811 | LPLADSPLCLDLLK | n[145]LPLADSPLCLDLLK | LPLADSPLCLDLLKHLSGENYSLLAYMCVLKNTCSHTHVSSRQQKISTF |
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