top of page
lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TAS2R1-9:2 | CCRC | 11 | 0.145431 | noncoding | 40 | chr5 | 9361752 | 9361986 | - | 0.9981 | lnc-TAS2R1-9 | 0.028 | -5.426 | -1.959 | -4.695 | 16 | noncoding | -0.48440062 | VPTNETMNGTK | n[230]VPTNETMNGTK | LVMVNSSQRVPTNETMNGTKRISRTISDRIWTLDPQNRPT |
lnc-TASP1-14:1 | PRAD | 7 | 0.022342 | noncoding | 62 | chr20 | 12595879 | 12597718 | - | 0.9978 | lnc-TASP1-14 | 0.678 | -2.951 | -5.193 | -4.435 | 16 | noncoding | -0.373926386 | IPRVTLK | LVGYRIPRVTLKTGTGSRQMCDSFITNNRNNFHRLMGEKSVLSVGLGNMERKVWSIRIHLWP | |
lnc-TATDN3-1:1 | OV | 10 | 0.110595 | noncoding | 85 | chr1 | 212824026 | 212824505 | + | 0.2679 | lnc-TATDN3-1 | 1 | 0 | 0 | 0 | 3 | noncoding | -0.299688674 | DLAHHQACLR | n[145]DLAHHQACLR | MMPQQLQETRDLAHHQACLRDHSPAHRRGLSAGPGERHHQQWSPGGLHTYWASRAWAVRPQAVEVSPLCRVNQAIWLLSTGAREA |
lnc-TATDN3-1:1 | OV | 9 | 0.110595 | noncoding | 85 | chr1 | 212824026 | 212824505 | + | 0.9349 | lnc-TATDN3-1 | 1 | 0 | 0 | 0 | 15 | noncoding | -0.299688674 | GLSAGPGER | n[145]GLSAGPGER | MMPQQLQETRDLAHHQACLRDHSPAHRRGLSAGPGERHHQQWSPGGLHTYWASRAWAVRPQAVEVSPLCRVNQAIWLLSTGAREA |
lnc-TAX1BP1-4:2 | OV | 8 | 0.895902 | coding | 278 | chr7 | 28409375 | 28410753 | + | 0.926 | lnc-TAX1BP1-4 | 1 | 0 | 3.999 | 0.339 | 16 | noncoding | -0.27175738 | FLEGQDAK | n[145]FLEGQDAK | MLTWSRRRVRPACVRVWERASPLTRGPVMNRGCVFASRDLARCGALQKCGQAAAETASQEPPPASPASQRGGGTPGESLQTSSGRGEDAGSPRGRVGARAGGSLSPVRSCSCHLSRRAAGCSGWARARGGEVALGGRLAFAPGAPGWRAARLRPLQSTPPAASCLRCFLAGIVTSSRPLPQMTAPARALAAPRQFPRPGGGVSPCGRFSAESLELFTKFLEGQDAKEGTKEMFSLSSCIPLLLCHRFIFKGRLVDKALDLVHTLTPIPNFPWTGAAPT |
Page 1 of 1
bottom of page