top of page
lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TBC1D29-5:1 | LUAD | 8 | 0.037863 | noncoding | 43 | chr17 | 30624264 | 30624775 | + | 0.5177 | lnc-TBC1D29-5 | 1 | 0 | 0 | 0 | 2 | noncoding | -0.278231911 | VGGSEGTK | VGGSEGTK | LLVAGLKKQFYKASQLVSEKVGGSEGTKLDNDFKEMEMSSARR |
lnc-TARBP1-6:1 | OV | 27 | 0.820696 | coding | 145 | chr1 | 234356703 | 234357141 | - | 1 | lnc-TARBP1-6 | 1 | 0 | 0 | 0 | 5 | coding | 0.79450949 | TFNQVEVKPEMIGHYLGEFSITYKPVK | n[145]TFNQVEVKPEM[147]IGHYLGEFSITYKPVK | MAEVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKRHYLLKRLRKAKKEAPPMEKPEVVKTHLRDVIILPEVVGSMVGVHNGKTFNQVEVKPEMIGHYLGEFSITYKPVKQCRSGIGATHSFCFIPLK |
lnc-TARBP1-6:1 | PRAD | 27 | 0.820696 | coding | 145 | chr1 | 234356703 | 234357141 | - | 1 | lnc-TARBP1-6 | 1 | 0 | 0 | 0 | 47 | coding | 0.79450949 | TFNQVEVKPEMIGHYLGEFSITYKPVK | TFNQVEVKPEM[147]IGHYLGEFSITYKPVK | MAEVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKRHYLLKRLRKAKKEAPPMEKPEVVKTHLRDVIILPEVVGSMVGVHNGKTFNQVEVKPEMIGHYLGEFSITYKPVKQCRSGIGATHSFCFIPLK |
lnc-TARS-6:1 | BRCA-Basal-like | 10 | 0.234218 | noncoding | 95 | chr5 | 33162159 | 33162867 | + | 0.5438 | lnc-TARS-6 | 1 | 4.476 | 0 | 0 | 2 | coding | 0.685278285 | MSHYVLPLGR | n[145]M[147]SHYVLPLGR | MSHYVLPLGRKKGAKLTPEEEEILNKKRFKQIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKGLEFYLRKIKARKGK |
lnc-TARS-6:1 | BRCA-HER2-enriched | 10 | 0.234218 | noncoding | 95 | chr5 | 33162159 | 33162867 | + | 0.5438 | lnc-TARS-6 | 1 | 4.476 | 0 | 0 | 2 | coding | 0.685278285 | MSHYVLPLGR | n[145]M[147]SHYVLPLGR | MSHYVLPLGRKKGAKLTPEEEEILNKKRFKQIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKGLEFYLRKIKARKGK |
Page 1 of 1
bottom of page