top of page
lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SNHG7:12 | OSCC | 16 | 0.84143 | coding | 72 | chr9 | 136720113 | 136728184 | - | 0.6212 | SNHG7 | 1 | -4.606 | 11.901 | -2.871 | 2 | noncoding | -0.22975378 | SAMSRTWPTSAGREGR | n[145]SAMSRTWPTSAGREGR | LEACSFSCRDSSSRNSLRCSRAHTDLASARDTRLSLLKSAMSRTWPTSAGREGRSPRFAWRLGPKERKSQLI |
SNHG7:3 | PRAD | 24 | 0.933781 | coding | 129 | chr9 | 136721365 | 136728184 | - | 0.6793 | SNHG7 | 1 | -4.434 | 11.382 | -3.891 | 1 | noncoding | -0.27013426 | QVLHSTICSSHRSWQTEPEMIPLR | QVLHSTICSSHRSWQTEPEMIPLR | LTLRKLRVISRNSLMEVPRVGLSNSTSSRRGAASDRALESRVSSMPHLMVTSLSRQSPLYTWTGPQRSSVQTSPSHCTGSISPRPTRPASGYTCWPGATERQVLHSTICSSHRSWQTEPEMIPLRYWSH |
SNHG7:3 | PRAD | 12 | 0.933781 | coding | 129 | chr9 | 136721365 | 136728184 | - | 0.4609 | SNHG7 | 1 | -4.434 | 11.382 | -3.891 | 1 | noncoding | -0.27013426 | SWQTEPEMIPLR | SWQTEPEM[147]IPLR | LTLRKLRVISRNSLMEVPRVGLSNSTSSRRGAASDRALESRVSSMPHLMVTSLSRQSPLYTWTGPQRSSVQTSPSHCTGSISPRPTRPASGYTCWPGATERQVLHSTICSSHRSWQTEPEMIPLRYWSH |
SNRK-AS1:3 | CCRC | 8 | 0.667677 | coding | 50 | chr3 | 43346918 | 43351962 | - | 0.9936 | SNRK-AS1 | 1 | -2.643 | -2.679 | -0.154 | 7 | noncoding | -0.300341293 | TGIQIFHK | n[230]TGIQIFHK | LAPGLWASQRYCFGSVSDTRECVSEPRVSTSQKVRTGIQIFHKEKHFFSL |
SOCS2-AS1:11 | BRCA-Basal-like | 17 | 0.448597 | noncoding | 99 | chr12 | 93559685 | 93571768 | - | 0.9261 | SOCS2-AS1 | 1 | 0 | -0.05 | 0 | 4 | noncoding | -0.256240159 | TAAGFPSGCDPGGGKER | n[145]TAAGFPSGCDPGGGKER | LGTRCPGMQPAPRSEAAVGVPCAEGTQKPRGSLPRPHPPPRGDAPYGLGHLHSRTAAGFPSGCDPGGGKERGREGGRSEGGRQAGGEEREIRLLGGLLI |
Page 1 of 1
bottom of page