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PepTransDB

The Maher Lab | Washington University

lncRNA Peptides

Use criteria below to search among 19,871 unique lncRNA peptides:

*Click Transcript to view full ORF and comprehensive information in new page. 

Transcript*
Cancer
Peptide Length
CPC Coding Probability
CPC Label
ORF Length
Chromosome
Start
End
Strand
Max Probability
Gene Name
Conservation Score
PhyloCSF Frame 1
PhyloCSF Frame 2
PhyloCSF Frame 3
No. of Spectra
CNTI Index
CNTI Score
Peptide
Modified Peptide
ORF
lnc-TBC1D7-1:7
EOGC
19
0.0240851
noncoding
52
chr6
13272748
13274386
-
0.9983
lnc-TBC1D7-1
1
-3.216
0.103
11.717
16
noncoding
-0.328906989
CSSVPVPLQLASGSAAYGK
n[145]CSSVPVPLQLASGSAAYGK
MGLVTYVSKCSSVPVPLQLASGSAAYGKNPGKVFGPYHSLLGSLISSALADT
lnc-TBC1D7-1:7
EOGC
28
0.0240851
noncoding
52
chr6
13272748
13274386
-
0.3062
lnc-TBC1D7-1
1
-3.216
0.103
11.717
1
noncoding
-0.328906989
MGLVTYVSKCSSVPVPLQLASGSAAYGK
n[145]MGLVTYVSKCSSVPVPLQLASGSAAYGK
MGLVTYVSKCSSVPVPLQLASGSAAYGKNPGKVFGPYHSLLGSLISSALADT
lnc-TBC1D8-7:1
BRCA-Luminal A
8
0.396096
noncoding
75
chr2
100993675
101002244
-
0.9984
lnc-TBC1D8-7
1
9.791
-3.995
-2.961
1
noncoding
-0.321390423
GWCLYLEK
n[145]GWCLYLEK
LLLTVQRGWCLYLEKKEQRASEVVLMSAPQLSYKAVRGMLQVELDYRAVFLGGSCGERWLWQDLGVWWGWGLREP
lnc-TBC1D8-7:1
OV
12
0.396096
noncoding
63
chr2
100993675
101002244
-
0.9717
lnc-TBC1D8-7
0.286
-4.372
-4.745
-5.38
2
noncoding
-0.321390423
MALQVQVGLQAR
n[145]MALQVQVGLQAR
MALQVQVGLQAREEAPPGQGRAGVKRGTLHMGEGRPGPSAAWQTQTCGSHVNLRTSGSHPPCF
lnc-TBC1D8-7:1
OV
25
0.396096
noncoding
63
chr2
100993675
101002244
-
0.1666
lnc-TBC1D8-7
0.286
-4.372
-4.745
-5.38
1
noncoding
-0.321390423
MALQVQVGLQAREEAPPGQGRAGVK
n[145]MALQVQVGLQAREEAPPGQGRAGVK
MALQVQVGLQAREEAPPGQGRAGVKRGTLHMGEGRPGPSAAWQTQTCGSHVNLRTSGSHPPCF
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