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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TBXT-5:1 | OV | 22 | 0.257817 | noncoding | 70 | chr6 | 165797658 | 165811780 | - | 0.0817 | lnc-TBXT-5 | 0.151 | 0 | 0 | 0 | 1 | noncoding | -0.298860226 | LLLEHVLIHQLSGPELGMNHRK | n[145]LLLEHVLIHQLSGPELGM[147]NHRK | LELARGDGVVCTLWGSQERGQSNHPDPSARLLLEHVLIHQLSGPELGMNHRKAAVLLPLRVHLDELKTSQ |
lnc-TBXT-5:1 | OV | 7 | 0.257817 | noncoding | 70 | chr6 | 165797658 | 165811780 | - | 0.6986 | lnc-TBXT-5 | 0.151 | 0 | 0 | 0 | 2 | noncoding | -0.298860226 | VHLDELK | n[145]VHLDELK | LELARGDGVVCTLWGSQERGQSNHPDPSARLLLEHVLIHQLSGPELGMNHRKAAVLLPLRVHLDELKTSQ |
lnc-TC2N-1:1 | BRCA-HER2-enriched | 7 | 0.0692669 | noncoding | 81 | chr14 | 91756758 | 91759798 | - | 0.9953 | lnc-TC2N-1 | 0.138 | -2.823 | -3.623 | -5.017 | 45 | noncoding | -0.426530341 | SSIDWIK | n[145]SSIDWIK | LGSPRICNVVWQAQDPRELMVQFQSHRSLLENFLWLGEGGLFILLRSSIDWIKCTYIMEGNLLYSEDISVNVIPIQKHLPS |
lnc-TBC1D2B-1:1 | OV | 13 | 0.067067 | noncoding | 44 | chr15 | 77954074 | 77963654 | - | 0.6884 | lnc-TBC1D2B-1 | 0.085 | 0 | 0 | 0 | 36 | noncoding | -0.373182004 | SEAGGLLEPGRSR | n[145]SEAGGLLEPGRSR | LSNMVKLRLYKKQKKSSVEACTCGFSYSRSEAGGLLEPGRSRLQ |
lnc-TBC1D2B-3:2 | CCRC | 10 | 0.346185 | noncoding | 68 | chr15 | 77939258 | 77942690 | - | 0.6061 | lnc-TBC1D2B-3 | 1 | 0 | 0 | 0 | 2 | noncoding | -0.284194843 | LSFMLSGTAK | n[230]LSFMLSGTAK | LSFMLSGTAKHSVDGESLASELQQLGLPKEHAASLCRCYEEKQSPLQKHLRVCSLRSKYEASQGPGSS |
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