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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TBX2-7:1 | EOGC | 11 | 0.959034 | coding | 156 | chr17 | 61069870 | 61070341 | + | 0.1015 | lnc-TBX2-7 | 1 | 0 | 5.027 | 0 | 1 | coding | 0.742716193 | VNTLIWPDGEK | n[145]VNTLIWPDGEK | MAPKAKKEAPAPPKAEAKAKALKAKKAVLKGVHSHKKKKIRTSPTFRQPKTLRLWRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKTEDNNTLVFLVDVKANKHQIKQAVKKLYDIDVAKVNTLIWPDGEKKAYVRLAPGYDALDVANKIGII |
lnc-TBX3-1:1 | OV | 8 | 0.0949729 | noncoding | 53 | chr12 | 114696244 | 114699087 | - | 0.8499 | lnc-TBX3-1 | 0.027 | -4.959 | -4.46 | -3.554 | 2 | noncoding | -0.335635425 | AAVLPTCR | n[145]AAVLPTCR | METSLLSIFNNVKAQDSLVVYPKVFCLCRAAVLPTCRQGVCSECKKRTGEFRS |
lnc-TBX3-1:1 | OV | 17 | 0.0949729 | noncoding | 53 | chr12 | 114696244 | 114699087 | - | 0.2678 | lnc-TBX3-1 | 0.027 | -4.959 | -4.46 | -3.554 | 2 | noncoding | -0.335635425 | AAVLPTCRQGVCSECKK | n[145]AAVLPTCRQGVCSECKK | METSLLSIFNNVKAQDSLVVYPKVFCLCRAAVLPTCRQGVCSECKKRTGEFRS |
lnc-TBX3-8:1 | OV | 23 | 0.0453298 | noncoding | 81 | chr12 | 114894631 | 114898529 | - | 0.3883 | lnc-TBX3-8 | 0.259 | -3.904 | -4.295 | -3.943 | 1 | noncoding | -0.342958617 | LLGLLPSMAADSQNKCSKGPWEK | n[145]LLGLLPSMAADSQNKCSKGPWEK | LFHAVSDGIVPVRIEYSFTRRLIHMAKLSCQPGTLIPLHVDFVMRLLGLLPSMAADSQNKCSKGPWEKLKSSYDLGLKVLE |
lnc-TBX3-8:1 | OV | 18 | 0.0453298 | noncoding | 81 | chr12 | 114894631 | 114898529 | - | 0.9451 | lnc-TBX3-8 | 0.259 | -3.904 | -4.295 | -3.943 | 1 | noncoding | -0.342958617 | LSCQPGTLIPLHVDFVMR | n[145]LSCQPGTLIPLHVDFVMR | LFHAVSDGIVPVRIEYSFTRRLIHMAKLSCQPGTLIPLHVDFVMRLLGLLPSMAADSQNKCSKGPWEKLKSSYDLGLKVLE |
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