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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TCP1-6:1 | EOGC | 20 | 0.107551 | noncoding | 58 | chr6 | 159962929 | 159968902 | - | 0.5761 | lnc-TCP1-6 | 0.071 | 0 | 2.995 | 0 | 9 | noncoding | -0.352297256 | ASVSPPTAPCWIVAGASQVR | n[145]ASVSPPTAPCWIVAGASQVR | LGAAGVPSRASVSPPTAPCWIVAGASQVRATVPNLDRPVGENRELGSKCQGGKCLRTA |
lnc-TCP1-6:1 | EOGC | 19 | 0.107551 | noncoding | 58 | chr6 | 159962929 | 159968902 | - | 0.0666 | lnc-TCP1-6 | 0.071 | 0 | 2.995 | 0 | 1 | noncoding | -0.352297256 | ATVPNLDRPVGENRELGSK | n[145]ATVPNLDRPVGENRELGSK | LGAAGVPSRASVSPPTAPCWIVAGASQVRATVPNLDRPVGENRELGSKCQGGKCLRTA |
lnc-TCP1-6:1 | EOGC | 9 | 0.107551 | noncoding | 58 | chr6 | 159962929 | 159968902 | - | 0.9988 | lnc-TCP1-6 | 0.071 | 0 | 2.995 | 0 | 10 | noncoding | -0.352297256 | LGAAGVPSR | n[145]LGAAGVPSR | LGAAGVPSRASVSPPTAPCWIVAGASQVRATVPNLDRPVGENRELGSKCQGGKCLRTA |
lnc-TBPL1-6:1 | BRCA-Basal-like | 12 | 0.035982 | noncoding | 41 | chr6 | 134177992 | 134183848 | + | 0.9989 | lnc-TBPL1-6 | 0.243 | 0 | -3.257 | -3.743 | 48 | noncoding | -0.401168631 | LILYSSMMSGKK | n[145]LILYSSM[147]M[147]SGKK | LILYSSMMSGKKNKPRRNFWRPRTTLLAWFPIIMSHTQLIL |
lnc-TBPL1-6:1 | BRCA-HER2-enriched | 12 | 0.035982 | noncoding | 41 | chr6 | 134177992 | 134183848 | + | 0.9989 | lnc-TBPL1-6 | 0.243 | 0 | -3.257 | -3.743 | 48 | noncoding | -0.401168631 | LILYSSMMSGKK | n[145]LILYSSM[147]M[147]SGKK | LILYSSMMSGKKNKPRRNFWRPRTTLLAWFPIIMSHTQLIL |
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