top of page
lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TCFL5-2:6 | EOGC | 9 | 0.559681 | coding | 156 | chr20 | 62782753 | 62794246 | - | 0.4739 | lnc-TCFL5-2 | 0.096 | 0 | 0 | 0 | 1 | noncoding | -0.315123294 | LLPYGSASR | n[145]LLPYGSASR | MLWRSEVLAGSSGFSVQGLMRLKLRFQPAGFLLGGSRKNWLPALTSCCQNPGPTVAGPGSHILAGCWPKAAPSFWRLLRSLAHGSILHLQSKTRSCPYLDSLCLRLLPYGSASREKLANALSFKGSYAGLTGESRIVPHLHLNHSCQVSFPRHTSW |
lnc-TCFL5-2:6 | EOGC | 17 | 0.559681 | coding | 156 | chr20 | 62782753 | 62794246 | - | 0.9976 | lnc-TCFL5-2 | 0.096 | 0 | 0 | 0 | 7 | noncoding | -0.315123294 | SEVLAGSSGFSVQGLMR | n[145]SEVLAGSSGFSVQGLMR | MLWRSEVLAGSSGFSVQGLMRLKLRFQPAGFLLGGSRKNWLPALTSCCQNPGPTVAGPGSHILAGCWPKAAPSFWRLLRSLAHGSILHLQSKTRSCPYLDSLCLRLLPYGSASREKLANALSFKGSYAGLTGESRIVPHLHLNHSCQVSFPRHTSW |
lnc-TCIRG1-1:6 | OSCC | 32 | 0.208242 | noncoding | 113 | chr11 | 68051632 | 68053761 | + | 0.8195 | lnc-TCIRG1-1 | 0.792 | -1.731 | 0 | 0 | 2 | noncoding | -0.292041846 | SHMQYSETHQCHTRPAGGESSAPHAGGLGCSR | n[145]SHM[147]QYSETHQCHTRPAGGESSAPHAGGLGCSR | LAPLGGEPGDREVLTLPPWPRMAVCTLHQEEGQGRSHMQYSETHQCHTRPAGGESSAPHAGGLGCSRAIRCSSFSHGTKRVKEQLLEAPGRGHLAAVTGDFAVHLCSLAVPWE |
lnc-TCP1-3:1 | BRCA-HER2-enriched | 10 | 0.641263 | coding | 76 | chr6 | 159712800 | 159713985 | - | 0.6682 | lnc-TCP1-3 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.364302279 | LDTMTEFTGR | n[145]LDTMTEFTGR | LKLDTMTEFTGRADVEFAAHEDAVAAMAKDKANMQHRYRETFLNAIGTSRGVYEHTYVELFLNLQQGQVVVLMVGK |
lnc-TCP1-3:1 | OV | 10 | 0.641263 | coding | 76 | chr6 | 159712800 | 159713985 | - | 0.511 | lnc-TCP1-3 | 1 | 0 | 0 | 0 | 1 | noncoding | -0.364302279 | LDTMTEFTGR | n[145]LDTMTEFTGR | LKLDTMTEFTGRADVEFAAHEDAVAAMAKDKANMQHRYRETFLNAIGTSRGVYEHTYVELFLNLQQGQVVVLMVGK |
Page 1 of 1
bottom of page