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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TCP11L2-4:3 | OV | 14 | 0.0542318 | noncoding | 110 | chr12 | 106139622 | 106143621 | + | 0.4409 | lnc-TCP11L2-4 | 0.999 | -2.199 | -3.302 | 0.124 | 1 | noncoding | -0.313471796 | GQPPGRGGRPGTWK | n[145]GQPPGRGGRPGTWK | LGQLRVQENPKSGALAPAPAPSPKKGESGTEGGREAEPRARRRTAGPPTPSGPRRGQPPGRGGRPGTWKRWGSKGAGTELAPQRRPPCQRRPPSEVGKPGTWGGPGPRAC |
lnc-TCP11L2-4:3 | OV | 12 | 0.0542318 | noncoding | 110 | chr12 | 106139622 | 106143621 | + | 0.9229 | lnc-TCP11L2-4 | 0.999 | -2.199 | -3.302 | 0.124 | 16 | noncoding | -0.313471796 | TAGPPTPSGPRR | n[145]TAGPPTPSGPRR | LGQLRVQENPKSGALAPAPAPSPKKGESGTEGGREAEPRARRRTAGPPTPSGPRRGQPPGRGGRPGTWKRWGSKGAGTELAPQRRPPCQRRPPSEVGKPGTWGGPGPRAC |
lnc-TCP11L2-4:3 | PRAD | 12 | 0.0542318 | noncoding | 39 | chr12 | 106139622 | 106143621 | + | 0.9957 | lnc-TCP11L2-4 | 0.515 | -2.135 | -3.672 | 0.124 | 1 | noncoding | -0.313471796 | FGPGPRALSEER | LRPPGATPSPGEPQERRFGPGPRALSEERRVRDGGRPGG | |
lnc-TDO2-4:1 | LUAD | 7 | 0.0357848 | noncoding | 46 | chr4 | 156006477 | 156006988 | + | 0.9786 | lnc-TDO2-4 | 1 | -5.346 | -4.152 | -4.805 | 3 | noncoding | -0.371676681 | GGQSSFK | n[230]GGQSSFK | LPNTFFTNLMRRGHMPRELMKLQNQRGGQSSFKISRNQTVMTGRAG |
lnc-TDRD15-1:1 | OV | 13 | 0.024307 | noncoding | 37 | chr2 | 21087003 | 21096811 | + | 0.7566 | lnc-TDRD15-1 | 0.034 | -5.937 | -6.424 | -4.285 | 7 | noncoding | -0.437193356 | DNPVQPVIVQMMK | n[145]DNPVQPVIVQM[147]MK | LGRLLRDNPVQPVIVQMMKLKPAECYFFFLLNFRIEN |
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