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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TEKT2-1:2 | BRCA-Basal-like | 7 | 0.944286 | coding | 138 | chr1 | 36060095 | 36060737 | + | 0.1898 | lnc-TEKT2-1 | 1 | -4.763 | -3.598 | -3.756 | 1 | noncoding | -0.349062333 | ALHEFAK | n[145]ALHEFAK | MSREIKPDLPFSRNDWQRISVFKERVSAKHASDGSEVFRWIADQELETVCDSRNLMDLFRALHEFAKGSDFYEIQEANDFDTARICCSLPISNLILIFLPRSLTDNSAKFSFSIIKPELNVCLAYPLRCSSVEQAGCP |
lnc-TEKT2-1:2 | BRCA-Luminal A | 7 | 0.944286 | coding | 138 | chr1 | 36060095 | 36060737 | + | 0.9887 | lnc-TEKT2-1 | 1 | -4.763 | -3.598 | -3.756 | 5 | noncoding | -0.349062333 | NLMDLFR | n[145]NLMDLFR | MSREIKPDLPFSRNDWQRISVFKERVSAKHASDGSEVFRWIADQELETVCDSRNLMDLFRALHEFAKGSDFYEIQEANDFDTARICCSLPISNLILIFLPRSLTDNSAKFSFSIIKPELNVCLAYPLRCSSVEQAGCP |
lnc-TEKT2-1:2 | BRCA-Luminal B | 7 | 0.944286 | coding | 138 | chr1 | 36060095 | 36060737 | + | 0.9887 | lnc-TEKT2-1 | 1 | -4.763 | -3.598 | -3.756 | 5 | noncoding | -0.349062333 | NLMDLFR | n[145]NLMDLFR | MSREIKPDLPFSRNDWQRISVFKERVSAKHASDGSEVFRWIADQELETVCDSRNLMDLFRALHEFAKGSDFYEIQEANDFDTARICCSLPISNLILIFLPRSLTDNSAKFSFSIIKPELNVCLAYPLRCSSVEQAGCP |
lnc-TEKT2-1:2 | BRCA-HER2-enriched | 7 | 0.944286 | coding | 138 | chr1 | 36060095 | 36060737 | + | 0.9887 | lnc-TEKT2-1 | 1 | -4.763 | -3.598 | -3.756 | 5 | noncoding | -0.349062333 | NLMDLFR | n[145]NLMDLFR | MSREIKPDLPFSRNDWQRISVFKERVSAKHASDGSEVFRWIADQELETVCDSRNLMDLFRALHEFAKGSDFYEIQEANDFDTARICCSLPISNLILIFLPRSLTDNSAKFSFSIIKPELNVCLAYPLRCSSVEQAGCP |
lnc-TEKT3-1:1 | BRCA-Luminal B | 14 | 0.0824089 | noncoding | 43 | chr17 | 15240426 | 15244396 | - | 0.9979 | lnc-TEKT3-1 | 0.02 | -5.298 | -5.34 | -6.142 | 20 | noncoding | -0.430214722 | AVPAPSILWHLEDK | n[145]AVPAPSILWHLEDK | MRAVPAPSILWHLEDKTEAKCRFLPWASLYSVELRLFLLSSLK |
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