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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SNHG19:3 | OV | 20 | 0.598821 | coding | 95 | chr16 | 2149325 | 2155358 | - | 0.928 | SNHG19 | 1 | -5.774 | -4.134 | 8.997 | 11 | noncoding | -0.258278871 | VEAGSFWGPGLEPVGTMGIR | n[145]VEAGSFWGPGLEPVGTM[147]GIR | LTHHPVGNSVRLPQGTGYGPSVMPAPGIGQLTMLVGCSHQPRCWKVEAGSFWGPGLEPVGTMGIRENLLLGYRRDSDVGPGQGLHSPGSQCLRWR |
SNHG19:3 | PRAD | 16 | 0.598821 | coding | 92 | chr16 | 2149325 | 2155358 | - | 0.7174 | SNHG19 | 1 | 0 | 0 | 0 | 2 | noncoding | -0.258278871 | EAAMGHGGMVATHLLR | EAAM[147]GHGGMVATHLLR | LPQGESKKAFEICGGKLTPPRVPMCLLREAAMGHGGMVATHLLRVLGLAESLKLQHPALEVDFFQQMRQTLQKTQLYSLGLKTKACAIKRPS |
SNHG19:3 | PRAD | 16 | 0.598821 | coding | 92 | chr16 | 2149325 | 2155358 | - | 0.7174 | SNHG19 | 1 | 0 | 0 | 0 | 2 | noncoding | -0.258278871 | EAAMGHGGMVATHLLR | EAAMGHGGM[147]VATHLLR | LPQGESKKAFEICGGKLTPPRVPMCLLREAAMGHGGMVATHLLRVLGLAESLKLQHPALEVDFFQQMRQTLQKTQLYSLGLKTKACAIKRPS |
SNHG20:1 | OV | 9 | 0.099783 | noncoding | 50 | chr17 | 77086715 | 77099174 | + | 0.6941 | SNHG20 | 0.109 | -2.988 | -3.56 | -2.782 | 5 | noncoding | -0.411609692 | LLLQPGFNR | n[145]LLLQPGFNR | LSRTPSPLLPLRKVPLPLQVVLTGITHTKETWRLPSWGTRLLLQPGFNRK |
SNHG20:1 | OV | 10 | 0.099783 | noncoding | 50 | chr17 | 77086715 | 77099174 | + | 0.273 | SNHG20 | 0.109 | -2.988 | -3.56 | -2.782 | 3 | noncoding | -0.411609692 | LLLQPGFNRK | n[145]LLLQPGFNRK | LSRTPSPLLPLRKVPLPLQVVLTGITHTKETWRLPSWGTRLLLQPGFNRK |
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