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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TEX29-3:1 | BRCA-Luminal A | 11 | 0.0710372 | noncoding | 62 | chr13 | 111292519 | 111295191 | + | 0.9961 | lnc-TEX29-3 | 0.056 | -2.702 | -4.261 | -2.992 | 6 | noncoding | -0.353264235 | SSQSPVLISGR | n[145]SSQSPVLISGR | MAQETSGQLLIPNICSQVATELLTPLEDFVFSYQLVKIRTLRSSQSPVLISGRDGVYVCSAR |
lnc-TDRD15-8:1 | OV | 11 | 0.00651325 | noncoding | 42 | chr2 | 21171164 | 21414818 | + | 0.8379 | lnc-TDRD15-8 | 1 | -5.029 | -5.085 | -4.32 | 2 | noncoding | -0.453505874 | VTIAMLMGLGR | n[145]VTIAMLM[147]GLGR | LGAFENCTHQLYGDEFPRVSLRKVTIAMLMGLGRQTSHCLEL |
lnc-TDRD3-3:4 | LUAD | 7 | 0.204912 | noncoding | 72 | chr13 | 63034974 | 63097696 | + | 0.9948 | lnc-TDRD3-3 | 0.135 | 0 | 0 | 0 | 2 | noncoding | -0.410751821 | SAGSYQK | n[230]SAGSYQK | MYPSGNTYINCNTTSVGNWDTDTKRKQCHVKTEAKSGVTDVQAKNLKSAGSYQKLRVREGSSSEASPGLSTC |
lnc-TDRD3-3:4 | LUAD | 9 | 0.204912 | noncoding | 72 | chr13 | 63034974 | 63097696 | + | 0.8686 | lnc-TDRD3-3 | 0.135 | 0 | 0 | 0 | 2 | noncoding | -0.410751821 | SGVTDVQAK | SGVTDVQAK | MYPSGNTYINCNTTSVGNWDTDTKRKQCHVKTEAKSGVTDVQAKNLKSAGSYQKLRVREGSSSEASPGLSTC |
lnc-TDRD9-3:1 | OSCC | 22 | 0.0411766 | noncoding | 94 | chr14 | 103892245 | 103894763 | + | 0.085 | lnc-TDRD9-3 | 0.08 | 0 | 0 | -4.882 | 1 | noncoding | -0.278677853 | SALLSRTGGSPFMPSGPGGGAR | n[145]SALLSRTGGSPFM[147]PSGPGGGAR | LSAPGTPSYHPGTGQPHAPSSRYLAPCLLGRPGLGRCAGLEVTRSALLSRTGGSPFMPSGPGGGARHHSPHLPREIISPHRHTSVGAGCPPSRT |
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