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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TFDP1-2:2 | BRCA-HER2-enriched | 11 | 0.0356054 | noncoding | 38 | chr13 | 113527259 | 113530621 | + | 0.9979 | lnc-TFDP1-2 | 0.011 | -3.716 | -4.548 | -5.44 | 29 | noncoding | -0.346537873 | LVAGGWGGWGR | n[145]LVAGGWGGWGR | LVAGGWGGWGRWGGSADGYRVSFWDDESILTWIVVIVV |
lnc-TEKT4-3:1 | OV | 15 | 0.183851 | noncoding | 94 | chr2 | 94912431 | 94912831 | + | 0.9997 | lnc-TEKT4-3 | 1 | 0 | 0 | 0 | 26 | noncoding | -0.39654176 | TTGFGMIYNSLDYAK | n[145]TTGFGMIYNSLDYAK | MTNRLLPRKQMLTDVLHLGKATVPKTEIRGKLAKMYKTTPDVISVFGFRTNFGGSKTTGFGMIYNSLDYAKKNEPKHRLARHGLYEKKKTSRRQ |
lnc-TEKT4-3:1 | OV | 15 | 0.183851 | noncoding | 94 | chr2 | 94912431 | 94912831 | + | 0.9997 | lnc-TEKT4-3 | 1 | 0 | 0 | 0 | 26 | noncoding | -0.39654176 | TTGFGMIYNSLDYAK | n[145]TTGFGM[147]IYNSLDYAK | MTNRLLPRKQMLTDVLHLGKATVPKTEIRGKLAKMYKTTPDVISVFGFRTNFGGSKTTGFGMIYNSLDYAKKNEPKHRLARHGLYEKKKTSRRQ |
lnc-TEN1-1:1 | OV | 21 | 0.0583542 | noncoding | 38 | chr17 | 75943831 | 75945142 | + | 0.2318 | lnc-TEN1-1 | 0.209 | 0 | 0 | 0 | 1 | noncoding | -0.564570619 | LGQMLWLTPIISALWEVLGQR | n[145]LGQMLWLTPIISALWEVLGQR | LGQMLWLTPIISALWEVLGQRGLCRSMISSNLQRHPIY |
lnc-TEN1-1:1 | OV | 9 | 0.0583542 | noncoding | 38 | chr17 | 75943831 | 75945142 | + | 0.9103 | lnc-TEN1-1 | 0.209 | 0 | 0 | 0 | 1 | noncoding | -0.564570619 | SMISSNLQR | n[145]SM[147]ISSNLQR | LGQMLWLTPIISALWEVLGQRGLCRSMISSNLQRHPIY |
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