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lncRNA Peptides
Use criteria below to search among 19,871 unique lncRNA peptides:
*Click Transcript to view full ORF and comprehensive information in new page.
Transcript* | Cancer | Peptide Length | CPC Coding Probability | CPC Label | ORF Length | Chromosome | Start | End | Strand | Max Probability | Gene Name | Conservation Score | PhyloCSF Frame 1 | PhyloCSF Frame 2 | PhyloCSF Frame 3 | No. of Spectra | CNTI Index | CNTI Score | Peptide | Modified Peptide | ORF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
lnc-TH-1:1 | OV | 17 | 0.311443 | noncoding | 47 | chr11 | 2206660 | 2211057 | - | 0.5239 | lnc-TH-1 | 0.087 | -2.78 | -5.337 | -4.44 | 5 | noncoding | -0.241850035 | TLSEGGAYPFPIMVWTR | n[145]TLSEGGAYPFPIM[147]VWTR | MTLSEGGAYPFPIMVWTRRCGASPTSYNWGRLTTTVEGTPWNSQTTS |
lnc-THAP12-1:4 | OSCC | 9 | 0.0298088 | noncoding | 43 | chr11 | 76442072 | 76444680 | - | 0.9777 | lnc-THAP12-1 | 1 | -4.639 | -1.857 | -4.551 | 5 | noncoding | -0.354938591 | IEASCLILK | n[145]IEASCLILK | LFLFHLICGEGLFVPILQVRKGAQYIVICGHKIEASCLILKIQ |
lnc-THAP12-3:1 | OV | 15 | 4.8e-7 | noncoding | 123 | chr11 | 76206421 | 76210730 | - | 0.4076 | lnc-THAP12-3 | 0.837 | 1.647 | 1.97 | -1.121 | 2 | noncoding | -0.279563214 | AACRTSGGRAGGGLR | n[145]AACRTSGGRAGGGLR | LSRPQLARIPGVLLAPLHEEGAFAARPAGVRTGPLETALAAPWAGRGTRARRARLASAPGGEQWSRAAGSRSAGTRQGWGRPSPRGTTLLAPATTPLGTHSRAACRTSGGRAGGGLRRGSSWV |
lnc-THAP2-2:1 | OSCC | 11 | 0.0110183 | noncoding | 42 | chr12 | 71448404 | 71448850 | + | 0.5516 | lnc-THAP2-2 | 0.757 | -5.59 | -3.15 | -4.288 | 7 | noncoding | -0.644845389 | LLLCDYENQIK | n[145]LLLCDYENQIK | LLLCDYENQIKISIEDVIFLNELFCIYIEVFTINIYFTVFVE |
lnc-THAP3-3:1 | LUAD | 8 | 0.0754968 | noncoding | 67 | chr1 | 7092726 | 7094456 | + | 0.9969 | lnc-THAP3-3 | 0.549 | -2.737 | -3.216 | 0.239 | 3 | noncoding | -0.359221567 | LEFGLQLR | n[230]LEFGLQLR | LEFGLQLRRGCHSGSCLTRMTFWNIHRAKRPHPEAQGVCLAEEGRWVSDVVKSGFESWLRHSVALRL |
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